Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0063 ATGGTTCATCGCGCAAGGGTGAGCCTTCAAAACTACTATCAATATCGGCATGTAGACAAACCCGGGTGGAAAGTAGGATGGACGTGGGCTAACAACGAAGTGATATGGTCAATGAGTGGTGCCATAGCAACTGATAGAGGGAATTGTTCATCTTACAGTGGTTCTCAGATGCCACATTCGTGCAAGAAAGATCCCATCATAGTTGATCTCTCTCAAGATGTCTCACAAAACAGGTCAGAACATTGTTGCCGTGGTGGCCTCCTCTCTGCCTCGTCTATTGATCCTTTCAATGCATTCTCTTCATTTGAACTTGAAGTGCGCAACGTCGGAGATAACAACCCTCTTGGACAACCACCTATTAATCTTACATTCATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTCATCCCTCTGTCTCCTCAGATTTTGGGGGACTAAGACAGGTTCCTGTTCTCAGAACTTGGAAGTCAGCATGTGCATACTCCAGTTTCTTAGCAGACACATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCACCATCACACCTTGCCGTAGTTGCAGTTGTGGATGCAGAGAAGCGGATAAAAGTACAGCATCTTGCATAAGGCCTAGTGATCCCTTGACATTGTCTAACGAGAACACAAATGAAATTATTGCATGCACCGACCACATGTGCCCAGTTCGAGTTCATTGGCATGTCAAGAACAACTATATGAACCAATGGAGAGTCAAGCTTACAATTTCTAACTACAATTACGACAGAAACTACTCAAACTGGAACGTGCTGGTTCAGCATCCTGGTTTCACACAAAAAGCAAGAACTTACAGCTTCAACAGCACTAAACTTCCCACCCTTGGCCTCCAAGATGGAGTTTCCCTATTTTGGGGAATAGATTATTACAACAATGAGCTAGTGCATGCTGATAAGGATGGAGTGGGTGTTGTGACAACAGAAATACTAATGGATAAAGATCCAGATTCATTTACAGTAAGTAATGGATGGGTATTTCCGAGAAGAATATATTTCAACGGGGAGAACTGCGAAATGCCTTTACCTGACACGTTTCCTATGTTACCAAATGGTAGTAGCTCCACTACTTACTGTGGTTTCACTCTTTTATCTATCCTTTTGTTTCTTGCCCTTTGA 1170 0.4376 MVHRARVSLQNYYQYRHVDKPGWKVGWTWANNEVIWSMSGAIATDRGNCSSYSGSQMPHSCKKDPIIVDLSQDVSQNRSEHCCRGGLLSASSIDPFNAFSSFELEVRNVGDNNPLGQPPINLTFMAPGPGYTCSPLLDTHPSVSSDFGGLRQVPVLRTWKSACAYSSFLADTLPVCCVSLSSFYNPTITPCRSCSCGCREADKSTASCIRPSDPLTLSNENTNEIIACTDHMCPVRVHWHVKNNYMNQWRVKLTISNYNYDRNYSNWNVLVQHPGFTQKARTYSFNSTKLPTLGLQDGVSLFWGIDYYNNELVHADKDGVGVVTTEILMDKDPDSFTVSNGWVFPRRIYFNGENCEMPLPDTFPMLPNGSSSTTYCGFTLLSILLFLAL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0063 389 PIRSF COBRA 1 389 IPR006918 GO:0010215|GO:0031225
Aed9g0063 389 Pfam COBRA-like protein 4 166 IPR006918 GO:0010215|GO:0031225
Aed9g0063 389 PANTHER PROTEIN COBRA 4 387 IPR006918 GO:0010215|GO:0031225
Aed9g0063 389 PANTHER COBRA-LIKE PROTEIN 4 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0063 Aed-Chr9 419772 421478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0063 3 389 COBRA Gene Family AT3G29810 46.429 5.86e-125 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0063 - - ccaj:109801855 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0063 9 419772 421478 Aed9g0063 9 419772 421478 ECH