Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0049 ATGGACCGTGACGACGACCCTTCTACACTTGCATGGCTTTGGACCATTGAAGCCCTGTCAGCTTGCAAACAAATCACTGCACCCACTCTGCAGGGTTTCATTGACGTAGCACCTGTGGGGCACAATAAATTTAGTAAAATTACAAAGGAACTGGTTGCCTTGAGGTGTTTGGAGGAACTGTCCTCTCATGTGGTTGACCCTGAAGCTTCTAGCTTGAATTCCAGAGTTCCATTCGATTTTTCGTGGGATTGTGACGATGTCCTCCAACAAATATTGGGCAAGGAGATCCCATTATCAAATCTGAAAATGGTTGGAGCAAAGCTATTGAAATGGGATGTTGGCCCATTTATTAAGCACAAAAGAGCTGACACTTTTAAATGTCACTTAGAGCAGCTAAGAGAAGCGATTTTAGAGGGTAGTCATCCGCATGGTGATTACCTTAAAGAAAAAAGTGGCGTATTTTCTGGGAGTACCAGTTATGCAGACAAGTCAGTGCCCATTGATAATAAGAGGAGCAGAAACTCAGCTGAAATGAAAGATTGTGTAAATGACAATGATGATTTCTCTAGAACCTCAAAGAAGATGAAATCCCATACACCACTTGCTGATTTTGTGTACAAAGGTGAAAAGGTTAACCTTAAAATGAAAAAGAAGCCAGAGCAAAATATTTCTTTGAAGTGTAATGAAGTTGATCGATTGCTGATTTGTGATGCAGATGTTGTCCAACCAGTGGTTCCTGAATATCATCCTGTTATGACAACCACCATCATGCCTCAGCATACCTTTGTAGCTGAACCTTGCAATGATACATCTATGGATGTAACTGACAATACTGCACATCATGCCATTCCAAAAAATGATGCTAATGCAGAAAAAAATCAGCATATAATTAATTTACACCAACCCAAACAGACGGAACCAGATATTACATCTTTAAATCTCTTTCAGAAGGCAGTTGCTAGTGATAAAACTATAGTTGATATGGTTAATGGCTGTGGAGCTGAGTTATCAAGTGATAGTGATGGATATCACAATGAAGAGAATTATCATGAAGCAAAAAATCATGAATTCCTGCGCTCCCACTGCACAGTTGATAAAGATTTCTCAGCATTGACTGAATCAATTGAAGAAAATCTTTGCATGAATTGTAATGAAGGTGGCCAGTTACTGGCTTGTAAATCAACTTCTTGCCCATTGATGGTGCATAAAAACTGTCTAGGTGCATATGCTCAATTGGATGCAAAGGGCAACTGTTTTTGCTTATTTTGTGAATCCTCTCATGCTATTTCAGAATATCGTGAAGCTAAGAAAAATTCTTCCTTGGAATTGAAAGAGTTTGCTATCTTTATTAGTAAACTGAATCAAGCTGCAGAACTTGTTCATGAATTTCATAGACAAGAACATTGTTTTTCAAGAAAGAGTAGCAAGTGTGAACATATTCATGGCAAAAACAATGAAGATGATCACTTAACAGGATGTGAAGGCAATAGAGAAGATCATGTTGGAGAGCAAGCAAATGAAGCCAATAATCTTCAAATGGATGCAAATCTTGGTGATGAATTTACTAGTGAAAAAACAAATACTGCCCCTCCAAATCGAAGCAATGCTGGAGAAGAAGTTCAAGAAATGACAAAACAGCACGGAAAAATAGTGCCTGTTTGTGCTCATGATACTGAAAAGAATGAAATTTCCGAAGATGGATGTAAAAATAGTATTCCTATATACTCCTTGAGGTTTCCTAAACATGACAGACAATGCGAACCCCAACCTAGCCCAGTATTTCCGGGTCAGTTGTTAAGACGCAAGAAAAATCCGTGGACCGCTGAGGAGGAAGAGGTGATAAAGGAGGGAGTCCAGAGGTTTGGCTTGAGTGATCCAAGGAAATGGATAAAAATTTTGCAATTCGGTTCTCATGTGTTTGATAAGGCTAGTAAGCGTCGCACGCCTCAAGACCTGAAGGATAAGTGGAGGAATATGTGCAAAGCTCAGTCAAAATCATAA 2001 0.3918 MDRDDDPSTLAWLWTIEALSACKQITAPTLQGFIDVAPVGHNKFSKITKELVALRCLEELSSHVVDPEASSLNSRVPFDFSWDCDDVLQQILGKEIPLSNLKMVGAKLLKWDVGPFIKHKRADTFKCHLEQLREAILEGSHPHGDYLKEKSGVFSGSTSYADKSVPIDNKRSRNSAEMKDCVNDNDDFSRTSKKMKSHTPLADFVYKGEKVNLKMKKKPEQNISLKCNEVDRLLICDADVVQPVVPEYHPVMTTTIMPQHTFVAEPCNDTSMDVTDNTAHHAIPKNDANAEKNQHIINLHQPKQTEPDITSLNLFQKAVASDKTIVDMVNGCGAELSSDSDGYHNEENYHEAKNHEFLRSHCTVDKDFSALTESIEENLCMNCNEGGQLLACKSTSCPLMVHKNCLGAYAQLDAKGNCFCLFCESSHAISEYREAKKNSSLELKEFAIFISKLNQAAELVHEFHRQEHCFSRKSSKCEHIHGKNNEDDHLTGCEGNREDHVGEQANEANNLQMDANLGDEFTSEKTNTAPPNRSNAGEEVQEMTKQHGKIVPVCAHDTEKNEISEDGCKNSIPIYSLRFPKHDRQCEPQPSPVFPGQLLRRKKNPWTAEEEEVIKEGVQRFGLSDPRKWIKILQFGSHVFDKASKRRTPQDLKDKWRNMCKAQSKS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0049 666 SMART sant 602 662 IPR001005 -
Aed9g0049 666 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 9 662 - -
Aed9g0049 666 MobiDBLite consensus disorder prediction 646 666 - -
Aed9g0049 666 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 372 435 IPR013083 -
Aed9g0049 666 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 600 664 IPR017930 -
Aed9g0049 666 SUPERFAMILY Homeodomain-like 600 661 IPR009057 -
Aed9g0049 666 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 9 662 - -
Aed9g0049 666 CDD SANT_TRF 605 661 - -
Aed9g0049 666 Gene3D - 598 663 - -
Aed9g0049 666 SUPERFAMILY FYVE/PHD zinc finger 375 428 IPR011011 -
Aed9g0049 666 Pfam Myb-like DNA-binding domain 603 658 IPR001005 -
Aed9g0049 666 ProSiteProfiles Myb-like domain profile. 600 660 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g0049 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0049 - - gmx:102661885 880.552