Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0046 ATGAGTATTGCATATTGTGTAGGGGAGAAAGGAAAGAATGCCAGTGGTGTAAAACTTCATTACAAAGGAATACCATTTCATAGGATAATATCAGGTTTTGTGATTCAGGGCGGAGACATTGTTCATCATGATGGTAGAGGATATGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAACATTCATGTGCTGGTGTAGTCTCTATGGTGAATTCAGGTTCTGATTCCAATGGATCACAGTTTTTTTTTACGACAGTGAAGACCAGTTGGTTAGATGGAGAACATGTTGTGTTTGGAAAAGTTGTCCAAGGCATGGATACTGTGTTTGCAATTGAAGGGGGTGCTGGAACCTACAACGGGAAACCTAGAAAGAAGGTAGTGATTTCAGACTCTGGAGAGATACCCAAGAGCCAGTGGGATAATAAGGAAAGATGA 447 0.4004 MSIAYCVGEKGKNASGVKLHYKGIPFHRIISGFVIQGGDIVHHDGRGYESIYGGTFPDENFKIKHSCAGVVSMVNSGSDSNGSQFFFTTVKTSWLDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVISDSGEIPKSQWDNKER 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0046 148 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 137 IPR002130 GO:0000413|GO:0003755
Aed9g0046 148 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 146 - -
Aed9g0046 148 SUPERFAMILY Cyclophilin-like 4 138 IPR029000 -
Aed9g0046 148 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 134 IPR002130 GO:0000413|GO:0003755
Aed9g0046 148 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 146 - -
Aed9g0046 148 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 84 IPR002130 GO:0000413|GO:0003755
Aed9g0046 148 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 96 IPR002130 GO:0000413|GO:0003755
Aed9g0046 148 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 26 38 IPR002130 GO:0000413|GO:0003755
Aed9g0046 148 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 IPR002130 GO:0000413|GO:0003755
Aed9g0046 148 PIRSF Peptidylpro_ismrse 2 143 IPR024936 GO:0003755
Aed9g0046 148 Gene3D - 2 145 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0046 Aed-Chr9 331093 331692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0046 20 132 U-box Gene Family AT5G67530 45.614 1.37e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0046 - - gmx:100808240 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0046 9 331093 331692 Aed9g0046 9 331093 331692 ECH