Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0034 ATGTCGAAAGAAGTGAGCGGCGAAGAAGGGCAGCAGAGGAAGGACTACGTAGACCCTCCGCCTGCCCCTCTCATGGACCTGGCCGAGATTAAGCTCTGGTCCTTCTACAGAGCTCTCATCGCCGAGTTCATTGCCACACTCCTCTTCCTCTATGTCACCGTCGCCACCGTCATCGGCCACAAGAAACAGTCCGGTCCTTGCGACGGCGTCGGCCTTCTCGGCATCGCTTGGGCCTTCGGTGGCATGATCTTCGTCCTCGTCTACTGCACTGCCGGCATTTCTGGTGGCCACATTAACCCTGCGGTGACTTTTGGACTGTTCCTGGCCCGCAAGGTGTCTCTGATTCGTGCGGTGTTCTACATGGTAGCACAGTGTCTAGGTGCTATCTGCGGTGTTGGGTTGGTGAAGGCCTTCATGAAGCACCCCTACAACTCCCTCGGCGGCGGTGCTAACTCCGTCAACTCTGGCTACACCAAAGGCACTGCTCTCGGTGCGGAGATTATCGGCACTTTCGTCCTTGTCTACACCGTTTTCTCAGCCACAGACCCCAAGAGAAGCGCCCGTGACTCCCATATCCCCGTATGTTTTTTCACTCGCTCGCGGTGTACCATATAA 615 0.5659 MSKEVSGEEGQQRKDYVDPPPAPLMDLAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHKKQSGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVFYMVAQCLGAICGVGLVKAFMKHPYNSLGGGANSVNSGYTKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVCFFTRSRCTI 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0034 204 Pfam Major intrinsic protein 30 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0034 204 PANTHER BNAC03G65520D PROTEIN 1 194 - -
Aed9g0034 204 SUPERFAMILY Aquaporin-like 29 194 IPR023271 -
Aed9g0034 204 Gene3D Glycerol uptake facilitator protein. 22 198 IPR023271 -
Aed9g0034 204 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0034 204 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0034 204 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0034 204 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0034 204 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 194 IPR034294 -
Aed9g0034 204 ProSitePatterns MIP family signature. 97 105 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0034 Aed-Chr9 227205 228684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0034 1 194 Major Intrinsic Protein MIP AT4G35100 88.265 3.15e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0034 K09872 - vra:106761912 366.696