Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0025 ATGGTGAGTGGAGAGCATAGCAGCCCAACAATGAAGCAAGCAGTAAGTCCAGGTGTTTCCGATCAGAGCCTGTCCAAGACTCGCATCTCACCTAATTCCCGGCACAACATTCGTTCAAAGTCTGGGAGAAGTAAGAGAAAAAACAACAACAACAACAACAACAACATCGCCTCCTTGAACCACCTTCAGGATCACCTCACTAATAGTCCTTACTACAAGGGTCTCACCGACCAATCCCTTGCCATCCCACCTACTGCGCCTCGTCTTCACCCTACTAACACCACTGATCACGATCACGATCACGACCTTCTCTCATCTAGTCCATATTATAAAGGTCTTCTTGCTATTAATATCACCCCTCACCCTTTTATTCCTACCAACAACTCCTCTTTTGCATACCTTCCTAGTCCATACTATAGAGGCCTTCTCACTGATTACGATTACACCACCACCCACCTTAAGCTTCTTTTTCACGGACCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTCTTTTTCTCTGGAGCTCATGCCCCAACCTCCAGAGGAGATGATGCTCGACGATATTATTATTGAACAACAAGATCAGAAGCCATTGAGGGAGAGAGTATCAGAAACAACATGCGATGATCATGAGATGGTGTCGTCTGAACAAGATCAGTATAGATGGGCAACCAAATACCAGCCCATGTACTTAGATGACTTCATCTGCCACAGAGATGAGGCACTTCAACTCAAAGCAAAGGTAAAACAGGGTTGTGGCTGCAGTCATTTTATATTTGAGGGACCACCAAGTGTTGGTAAGAGATCAATCATACGGGCTATGCTTCGTGAGGTTTTTGGACCCGACAGACTCCAGATTACAGAAGTATGCAGAATCTTCAATATCAAGGGAGAAATGGTTGATAATATCCAAGTGCGTTTGAAGAAATCACTGCATCATGTTGAGGTGAATCTGTCAGAGACAAAGGGATATGAAAAGCATGTAATTGCTGATTTATTCAAGGAAACATACGACCAGCTCATGAATAACTCGGAGCCTTGTTTCCCAGAAAACTGCAAAGCAATAATATTGTATGAGGCGGAGAAGCTATCGATAGAATCGTTGTTGTATATAAAGTGGCTACTGGAAAAGTACAAAGGCTGTAATAAGGTCTTCTTTTGTTGCTCTGATGAATCAAAGCTCCAACCTGTCAAGCCACTTTGCATCACCGTCCGCCTTTCATCACCATCAACCCAAGAGCTTGTTCAGATTTTGGAACATATTGGAAATAAGGAAGGAATAGAATTATCACGCGACTTAGTCGAGGAGATAATCTTGAGGTCAAAAAACAATCTACGCCAAGCCGTTCGTTCGTTGGAGGCCACTTGCCGAAACAGGTTGTACGTCATTCGTAGAAAGCTTCAAAGTCTTATGATTCATGATGTTTCTCCTGACTTTATTTACAAGTCTTTGGTGCCAGAGTTAACGAATCTTGTTGATGAATCGCTTCGCCCAGGGGTTGCCAAACTCGACAAGGAGTTTATTAGACCTAGTGAAATCAAATTTGAAACTATGAAGCAGTTCGGTCATGCTCAACACAAACAAGCAGAATTCATTGAGAAGAACAATGACTCAACCAAACAGAATAGGTTAACTTACTTAAAAGTCGAAGAGTTTACAGCGAAATTCATGAGTTGGTACAAGAATTCGTGTGGAAAAGGCAATAAGCAGTAG 1713 0.4291 MVSGEHSSPTMKQAVSPGVSDQSLSKTRISPNSRHNIRSKSGRSKRKNNNNNNNNIASLNHLQDHLTNSPYYKGLTDQSLAIPPTAPRLHPTNTTDHDHDHDLLSSSPYYKGLLAINITPHPFIPTNNSSFAYLPSPYYRGLLTDYDYTTTHLKLLFHGPPPPPPPPSPSFSLELMPQPPEEMMLDDIIIEQQDQKPLRERVSETTCDDHEMVSSEQDQYRWATKYQPMYLDDFICHRDEALQLKAKVKQGCGCSHFIFEGPPSVGKRSIIRAMLREVFGPDRLQITEVCRIFNIKGEMVDNIQVRLKKSLHHVEVNLSETKGYEKHVIADLFKETYDQLMNNSEPCFPENCKAIILYEAEKLSIESLLYIKWLLEKYKGCNKVFFCCSDESKLQPVKPLCITVRLSSPSTQELVQILEHIGNKEGIELSRDLVEEIILRSKNNLRQAVRSLEATCRNRLYVIRRKLQSLMIHDVSPDFIYKSLVPELTNLVDESLRPGVAKLDKEFIRPSEIKFETMKQFGHAQHKQAEFIEKNNDSTKQNRLTYLKVEEFTAKFMSWYKNSCGKGNKQ 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0025 570 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 178 458 - -
Aed9g0025 570 MobiDBLite consensus disorder prediction 1 57 - -
Aed9g0025 570 MobiDBLite consensus disorder prediction 75 100 - -
Aed9g0025 570 PANTHER OS10G0574500 PROTEIN 178 458 - -
Aed9g0025 570 MobiDBLite consensus disorder prediction 1 37 - -
Aed9g0025 570 Gene3D - 220 409 IPR027417 -
Aed9g0025 570 Gene3D - 442 560 - -
Aed9g0025 570 PANTHER OS10G0574500 PROTEIN 459 565 - -
Aed9g0025 570 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 459 565 - -
Aed9g0025 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 464 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0025 Aed-Chr9 172937 176272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0025 222 562 Core DNA Replication Machinery Family AT5G27740 26.579 3.35e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0025 K10756 - gmx:102664389 655.981