Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0008 CTAAAATTCGCTTTTTCATCATTCCTTATTAGTTTCAGTGTTGGCTGTGCTGTCGCCCCATATCGAGTGAGATTCATTTCTTCTTCTTCAGATTCGACCATGCAGATGGAGGGCTCAAAGGAAAACCGTGTGGCTCCAATTCCGCTCATACCCTCTTCAAATCTTCAAGGTGGTCCAAGAATGAAGTCCATCCATCATCGTCTGCCTCTCGGCAACATCAGTCAGAATGTTATGGCCCCTGCTGCTCATGTCAACAAACTAGATCTTTCCCGCAAGTGTACGCCACACACAGTTCAGCACCACGTCCCTCAGCCACAGCCTCAAGAACCTAAGAAACATTACCAGTTAGATTGTGATATCATAGATATTGATGATGACAATGCAGTTCCGGTGTTTGTGAAGCACACTGAAGCTATGCTTGACGAAATTGACAGGATAGAGGAAGTTGAAATGGAAGATGTAGAGGAACCTGTTTTGGACATCGATGCCTTTGATAGGAAAGATCCACTATCAGTGGTTGAGTACATAGATGATATATACAGTTTCTACAAAAGTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCATCAGGCAGTGATCAGAAAGAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAGTAGCTTGTAAGTATGAGGAGGTCTCAGTCCCTACCGTTGAGGATTTTGTTCTGATAACAGACAAGGCATATACAAGAAATGAAGTTTTAGATATGGAGAAATTAATGATGAATATCTTGCAATTCAAGTTGTCTGTGCCTACTCCGTACATGTTCATGAGACGATTTCTTAAGGCAGCTCATTCTGATAAAAAACTTGAGCTCTTGTCTTTCTTCTTGGTCGAGCTTTGCTTGGTAGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTAGCCGCTGCAGCCGTTTACACAGCTCAATGTAGTATGTACCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTATACTGATTACTCAGAAGAGCAGCTTATATCGCTTTTGGTTGAACTAGAAGTTTGTTTTGCTGAGAGCTTCACTGACCGACCTAGCTTGTGGATTCAGTAG 1134 0.4206 LKFAFSSFLISFSVGCAVAPYRVRFISSSSDSTMQMEGSKENRVAPIPLIPSSNLQGGPRMKSIHHRLPLGNISQNVMAPAAHVNKLDLSRKCTPHTVQHHVPQPQPQEPKKHYQLDCDIIDIDDDNAVPVFVKHTEAMLDEIDRIEEVEMEDVEEPVLDIDAFDRKDPLSVVEYIDDIYSFYKSIEVHYKFELLEETLFLTVNLIDRFLEHQAVIRKKLQLVGVTAMLVACKYEEVSVPTVEDFVLITDKAYTRNEVLDMEKLMMNILQFKLSVPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAVYTAQCSMYQFKQWTKTSEWYTDYSEEQLISLLVELEVCFAESFTDRPSLWIQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0008 377 PANTHER CYCLIN-B2-3-RELATED 96 187 - -
Aed9g0008 377 Gene3D - 275 360 - -
Aed9g0008 377 CDD CYCLIN 274 354 IPR013763 -
Aed9g0008 377 PANTHER CYCLINS 96 187 IPR039361 -
Aed9g0008 377 SMART cyclin_7 186 267 IPR013763 -
Aed9g0008 377 SMART cyclin_7 280 362 IPR013763 -
Aed9g0008 377 CDD CYCLIN 186 266 IPR013763 -
Aed9g0008 377 PANTHER CYCLIN-B2-3-RELATED 186 356 - -
Aed9g0008 377 SUPERFAMILY Cyclin-like 275 361 IPR036915 -
Aed9g0008 377 SMART Cyclin_C_2 276 377 IPR004367 -
Aed9g0008 377 Gene3D - 186 274 - -
Aed9g0008 377 Pfam Cyclin, N-terminal domain 186 274 IPR006671 -
Aed9g0008 377 PANTHER CYCLINS 186 356 IPR039361 -
Aed9g0008 377 Pfam Cyclin, C-terminal domain 276 359 IPR004367 -
Aed9g0008 377 SUPERFAMILY Cyclin-like 167 273 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0008 Aed-Chr9 79978 82294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0008 39 355 Core Cell Cycle Gene Families AT1G20610 47.545 2.76e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0008 K21777 - gmx:100812029 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0008 9 79978 82294 Aed9g0008 9 79978 82294 ECH