Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0006 ATGGAGTCGTCGGCGCAAATAATATTCCAAGAAGAATCATTATTACTATCAGACCCGGAAAGTTTGATGGCGGGGAAAAGATGGTGGATTGGACCAAGGGCGAATCCGGGGCCATCTTCCTCTGTGAAAGAGAGATTAGTGATTGTCGTTGGGTACTTGAAAGAATACGCCAAGAATTCCAATTTGCTGATTCAGGTATGGGTGCCCGCACGGAGATCTGCTGCACCACGTGCTCAGGCTCAGGATTACTACCCTTACGCGCTTCTTGATGGATCGGGATCAGCTTTTCAGTTTCAGTTTCTGCAGGATGATTGGGATCAGTGGACTCCCATTCCCAACGTCCGCTTCTTCAGAAGTCACGAGTACCCACGCGATCTACGTCCTGCTCCTGGATCTCTCGCCCTTCCTGTCTTTGAGAGAGGCACTGCCATATGTCTCGGTGTTGTCCAGATTCTCATGCCCAACAACCCCCCCGACCTTAACCTTCACAATGCCGTCCTTCAGAGTGTTGATTTTAGAAGTACTTCTCATCAGAACTTTATTCCACCAGCCGTAACCGTGATCAAGGAGGGGCCGGGTTTTGACGAGTTGTACCAAAGTGCATTAAATGAGATAGTAGAAGTTTTGACGTGTGTATGCAAGGCGCATAACTTGCCTTTAGCTCTCACATGGGCTCCCTGCATCCAACAAGCTGCTGGAAAGAGTGGATGTGGGCATTCAAACGATGAGAATTATGTGTCGACTGTGGATCCTGCTAGTTTTGTGGCGGATGTAGAGGTGTTGGGTTTCCTGGAAGCGTGCTCGGAGTACCACCTTTTGGGGGGACAAGGCGTAGTTGGGACAGCTTTCACAACCACCAAACCTTGTTTTGCAAATGACATAACTGCCTTCACCAAGGCAGAATATCCTCTGGCACACCATGCTAACATGTTTGGCTTGCATGCTGCTGTGGCCATTCCACTCCGGAGTGTATCGCTCTCGGCTGATTTTGTGTTAGAGTTTTTTCTGCCAAAGGATTGCCATGACAGCCTAGAGCAGAAGCAGATGCTCAACTCATTGAGGTATTCGAAGGAACAGGCAGTGGGGGAGGAGAAGAATCATATACTGGTTATGGTGGCCGCCGGGGTGGCAGGAAATCAGGCGACAAGAGACGAACCAAGGCAGAGAAGACTATCAGCTTGCCCGTTCTTCGACAATACTTTGCAGGAAGCCTCAAAGACGCTGCCAAGAGCATTGGCGGGCGCGGAAGGTGCCATTCAAATTGGCTCTTTCTATTCCAGTTTTCCAGAGTTGAGCTCTGCAAATGGAAATGGTGTTTCTGAAACTAGCTTGTATAACCAAGGCCAAGGCCAAGGAGGTACTACTACTAGTCACCCCATTCCAAACACTATTCTGATGTCAGAGAACCAACAACAACCTGGACTTATTGGTTCATCTGCATCAATCCAGATCGCCCACGCCCACCATCCTAATCCTATTCCTATTGAGGTTGAGGCTCTACCTCCCTTGCCCCAATCTAGTGTCTGGAACATGGGTACTTTTAGAGTCAAAGCTACTTTTGGGGATGAAAAAATTCGTTTTAGCTTGCAACCAAATTGGGGATTCATAGATTTGCAGATGGAGATAGCAAGACGTTTCAATCTAAACGAGATTAGCAGCAACATTCAGCTCAAGTATTTGGATGATGCTCGAGAGTGGGTTCTTTTAACGTGCGATGCTGATCTTGATGAGTGTAAAGACATAAATAGATCATCTCAGAGCCGCACAATTAGACTCTTCCTCTTTCAAGCAGATGCAAATGCATTTTGA 1809 0.4765 MESSAQIIFQEESLLLSDPESLMAGKRWWIGPRANPGPSSSVKERLVIVVGYLKEYAKNSNLLIQVWVPARRSAAPRAQAQDYYPYALLDGSGSAFQFQFLQDDWDQWTPIPNVRFFRSHEYPRDLRPAPGSLALPVFERGTAICLGVVQILMPNNPPDLNLHNAVLQSVDFRSTSHQNFIPPAVTVIKEGPGFDELYQSALNEIVEVLTCVCKAHNLPLALTWAPCIQQAAGKSGCGHSNDENYVSTVDPASFVADVEVLGFLEACSEYHLLGGQGVVGTAFTTTKPCFANDITAFTKAEYPLAHHANMFGLHAAVAIPLRSVSLSADFVLEFFLPKDCHDSLEQKQMLNSLRYSKEQAVGEEKNHILVMVAAGVAGNQATRDEPRQRRLSACPFFDNTLQEASKTLPRALAGAEGAIQIGSFYSSFPELSSANGNGVSETSLYNQGQGQGGTTTSHPIPNTILMSENQQQPGLIGSSASIQIAHAHHPNPIPIEVEALPPLPQSSVWNMGTFRVKATFGDEKIRFSLQPNWGFIDLQMEIARRFNLNEISSNIQLKYLDDAREWVLLTCDADLDECKDINRSSQSRTIRLFLFQADANAF 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0006 602 MobiDBLite consensus disorder prediction 439 462 - -
Aed9g0006 602 PANTHER PROTEIN NLP8 411 598 IPR045012 GO:0003700
Aed9g0006 602 PANTHER PROTEIN NLP8 16 361 IPR045012 GO:0003700
Aed9g0006 602 SMART PB1_new 513 597 IPR000270 GO:0005515
Aed9g0006 602 Pfam PB1 domain 513 596 IPR000270 GO:0005515
Aed9g0006 602 ProSiteProfiles PB1 domain profile. 513 597 IPR000270 GO:0005515
Aed9g0006 602 SUPERFAMILY CAD & PB1 domains 509 597 - -
Aed9g0006 602 Gene3D - 514 598 - -
Aed9g0006 602 PANTHER PROTEIN NLP2 411 598 - -
Aed9g0006 602 PANTHER PROTEIN NLP2 16 361 - -
Aed9g0006 602 CDD PB1_NLP 514 596 IPR034891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0006 Aed-Chr9 51785 54220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0006 406 591 NLP Transcription Factor Family AT1G76350 29.469 7.18e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0006 - - gmx:100787220 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0006 9 51785 54220 Aed9g0006 9 51785 54220 ECH