Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2183 ATGGATGCTTTGTGTGACCAGAGTCACAAAGGGAAATTAGCCATGTTGGATTTCTCACAAAACAGTACTGTGGTTCATTCATCATCAGAAGCTGCTTTAATCAAGTCGTCATCATCACCCCTTCCTCTCTTTGATGAGAATATTGGATTGGTGATGAGTGAACCCCAACAACGATGCACTGATCAAAGGATTCAGCAAAAGATGAAGGTGGCAATGGATACCAGCATTATCAAGGGACAATGGAATTCTCAAGAGGACAGAGTTGTTGTGGAATTGGTGAAGCAACATGGGCTAAAGAAATGGTCAGAAATTGCGAAGTCACTGCCGGGCAGGATTGGGAAGCAGTGTAGGGAAAGATGGCTGAACCATCTACAGCCAAACATCAAGAAGGCTCCGTGGACCCTGGAGGAAGATGAGACTCTAATCCAAGCTCACAAAGAGTTCGGGAATAAATGGACGATGATTGCTACGAAGTTGCCTCACAGGGCTGAAAACACCATCAAGAACCATTGGAACACCTCGAAGCGCCGCCAAAACTGCAAAGGGAACAAGAAGAAGAACACTAGGCCCAACTACTCCCCTTATGAAGGGTCTTCAGTGCTCCTTTCCTACATCAAGAAGGTCACTGCTGCTGAAGAAAGCAAGAAGAAGAATAAGAATAAGAAGGTTCAAAGATGCACTTGTGATGATGAGCTTGCTCTTTTGTTGAGCTACGTGGTAGAACAAAGAGACACCCCGATACCACCGGCCTATTGA 756 0.4537 MDALCDQSHKGKLAMLDFSQNSTVVHSSSEAALIKSSSSPLPLFDENIGLVMSEPQQRCTDQRIQQKMKVAMDTSIIKGQWNSQEDRVVVELVKQHGLKKWSEIAKSLPGRIGKQCRERWLNHLQPNIKKAPWTLEEDETLIQAHKEFGNKWTMIATKLPHRAENTIKNHWNTSKRRQNCKGNKKKNTRPNYSPYEGSSVLLSYIKKVTAAEESKKKNKNKKVQRCTCDDELALLLSYVVEQRDTPIPPAY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2183 251 PANTHER MYB PROTEIN-RELATED 59 220 - -
Aed8g2183 251 CDD SANT 81 124 IPR001005 -
Aed8g2183 251 SMART sant 129 177 IPR001005 -
Aed8g2183 251 SMART sant 77 126 IPR001005 -
Aed8g2183 251 SUPERFAMILY Homeodomain-like 75 171 IPR009057 -
Aed8g2183 251 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
Aed8g2183 251 ProSiteProfiles Myb-like domain profile. 73 124 IPR001005 -
Aed8g2183 251 CDD SANT 132 175 IPR001005 -
Aed8g2183 251 Pfam Myb-like DNA-binding domain 81 141 - -
Aed8g2183 251 PANTHER MYB DOMAIN PROTEIN 100-RELATED 59 220 - -
Aed8g2183 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 179 IPR017930 -
Aed8g2183 251 Gene3D - 77 129 - -
Aed8g2183 251 Gene3D - 131 196 - -
Aed8g2183 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 128 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2183 Aed-Chr8 26133044 26136487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2183 74 211 MYB Transcription Factor Family AT4G18770 55.072 2.45e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed8g2183 Myb_DNA-bind_6 7.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2183 K09422 - gmx:102668949 219.55