Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2173 ATGGACAAAAAACCATGCAACTCATCATCTCAAGAACCTGAAGTTAGAAAGGGACCATGGACCATGGAAGAAGACTTGATCTTGATCAACTATATTGCAAATCATGGTGAAGGTGTTTGGAACTCCTTAGCCAAAGCTTCTGGTCTTAAACGAACGGGAAAGAGTTGTAGACTCCGTTGGCTAAACTACCTTCGTCCTGATGTTAGAAGAGGAAACATTACATCCGAAGAACAGCTTTTGATCATAGAACTTCATTCAAAGTGGGGAAATAGGTGA 276 0.4094 MDKKPCNSSSQEPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKASGLKRTGKSCRLRWLNYLRPDVRRGNITSEEQLLIIELHSKWGNR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2173 91 Gene3D - 17 69 - -
Aed8g2173 91 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 1 91 - -
Aed8g2173 91 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Aed8g2173 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Aed8g2173 91 SMART sant 16 66 IPR001005 -
Aed8g2173 91 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Aed8g2173 91 SUPERFAMILY Homeodomain-like 18 91 IPR009057 -
Aed8g2173 91 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 91 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aed8g2173 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 91 IPR017930 -
Aed8g2173 91 CDD SANT 19 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2173 Aed-Chr8 26055738 26056132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2173 11 91 MYB Transcription Factor Family AT3G01530 85.185 5.52e-48 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed8g2173 Myb_DNA-binding 3.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2173 K09422 - gmx:100305972 187.963