Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2166 ATGCCTGAAGGGAGCAAAAGGAGGATACGTTTTAGCAAATTGTACAGTTTTTCTTGTTTGAAATCTTCATTCAGACATGGTCATTCCCAAATTGGGAAGAAGGGGTACTCAAGGGTTGTCCACTGCAATGATCTGGATAACCCTGAAGCAGTTCAGTTGAATTATGGAGGCAATTATGTTTCAACAACAAAGTATACAGCTTTTAATTTCATCCCCAAGTCTCTGTTTGAGCAGTTCAGAAGGGTTGCAAATATCTACTTTCTTGTTGTTGCCTGTGTTTCATTTAGTCCATTGGCACCTTTTACTCCTCTGAGTATTGTTGCTCCTTTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAACAGGATATAGAGGCAAACAACCGAAAGGTTCAGGTATATGGTAGAAATTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTTCTTCTGCTTTCTTCAAGCTATGATGACGGGGTTTGTTATGTCGAGACTATGAATCTTGATGGAGAAACTAATCTAAAATTAAAGCATGCCTTGGAGGCGACAACTCATCTTCAAGATGAAAAATCTCTCCAAAAGTTTAAGGCTGTGGTTAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTATTGGAACTTTACATTATGATGGTAAAGAACATCCTCTTTCCTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGCGTTGTTGTCTTTACTGGCCATGATACAAAAGTCATGCAGAACTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTCAGTACCTTGGTTTTGATATCCTTTATTGGTTCTGTGTTTTTTGGTGTTGAGACCAAAAGGGATATAAGTGCTGGCAGGTACAGAAGATGGTATCTTCGTCCAGATGATACAACGGTGTTTTATGATCCTAGTAGGGCAACACTTGCTGCTGTTCTTCATTTCTTGACTGCACTTATGCTGTATGGATATCTAATTCCAATATCACTTTATGTGTCCATTGAACTTGTGAAAGTTCTGCAGAGCATTTTCATCAACCATGACCAGGAAATGTATTATGAAGAAACAGATAGGCCGGCTCGTGCGCGCACATCTAATTTGAATGAAGAACTTGGTCAGATTGATACAATATTGAGTGACAAAACTGGTACTTTGACATGTAACTCGATGGAGTTTGTCAAGTGTTCAATAGGGGGCATTCCATATGGTCGTGGCATGACGGAAGTGGAGAAGGCGCTTGCTAGGAGAGGAAAAGATGTGGAATCTGAAGTGGATGGAGGATCATCTGATTTCTTGGTTCAGAATAATGATGCTGTGGACACTCGGCAGCATCCAATTAAGGGCTTTAACTTTAGAGATGAGCGCATAATGAACGGGCAATGGGTTAAAGAACGGTGTCCGGACTTCGTTCAGAGATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGTAGATAAAGAGTCAGGGGAGATTTCTTATGAAGCAGAGTCACCGGACGAAGCTGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAACATATCATTGCATGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGGCTCTCGCAACATGGAAGGCAATTTGAGGCTGAAACCAGGGATCATATCAAAAGATATTCTGAGGCTGGTTTAAGAACTCTTGTAATCACATACCGTGAACTTGATGAAGAAGAATATAAGTTGTGGGACAATGAGTTTTCAAAGATCAAAACTACTATAACAGAAGATCGAGATGCCCTGGTGGATGCAGCTGCTGATAAGATGGAAAGGGATTTGATTCTTCTTGGTGCTACTGCAGTTGAGGATAGGCTGCAAAAGGGGGTTCCTGAATGTATTGAAAAGCTTGCCCAGGCAAAAATCAAGTTATGGGTGTTAACTGGAGACAAGATGGAAACTGCAGTCAACATAGGCATTAAGAAGCAAATTAGAGAAGGAATCTCGCAAATCAAGTCTGCAAAAGAGAGTTCTAATACAAATAGAGGAAGTTCTTCCGGGTTTGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAAAGGTCCTTCTTTGAGCTGGCAATTAATTGTGCTTCTGTCATATGTTGCCGTTCTTCACCCAAACAAAAAGCTCGTGCTGTAATGGCAAGTGATTTTGCAATAGCCCAATTCCGGTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATCGGCGTATATCAATGATGATAGCAGAGGCAGGATTTGTGTAG 2448 0.404 MPEGSKRRIRFSKLYSFSCLKSSFRHGHSQIGKKGYSRVVHCNDLDNPEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTPLSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSSSYDDGVCYVETMNLDGETNLKLKHALEATTHLQDEKSLQKFKAVVKCEDPNENLYSFIGTLHYDGKEHPLSLQQILLRDSKLKNTDYIYGVVVFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVFFGVETKRDISAGRYRRWYLRPDDTTVFYDPSRATLAAVLHFLTALMLYGYLIPISLYVSIELVKVLQSIFINHDQEMYYEETDRPARARTSNLNEELGQIDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKDVESEVDGGSSDFLVQNNDAVDTRQHPIKGFNFRDERIMNGQWVKERCPDFVQRFFRVLAICHTAIPDVDKESGEISYEAESPDEAAFVIAARELGFEFFARTQTNISLHELNYESGKKVDRLSQHGRQFEAETRDHIKRYSEAGLRTLVITYRELDEEEYKLWDNEFSKIKTTITEDRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLAQAKIKLWVLTGDKMETAVNIGIKKQIREGISQIKSAKESSNTNRGSSSGFGLIIDGKSLDYSLNKNLERSFFELAINCASVICCRSSPKQKARAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMIAEAGFV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2166 815 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Aed8g2166 815 SUPERFAMILY HAD-like 412 777 IPR036412 -
Aed8g2166 815 Pfam haloacid dehalogenase-like hydrolase 420 700 - -
Aed8g2166 815 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 809 IPR023298 -
Aed8g2166 815 Pfam E1-E2 ATPase 136 328 - -
Aed8g2166 815 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 585 716 - -
Aed8g2166 815 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 586 - -
Aed8g2166 815 CDD P-type_ATPase_APLT_Dnf-like 57 809 - -
Aed8g2166 815 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Aed8g2166 815 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 576 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed8g2166 815 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 712 775 - -
Aed8g2166 815 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 775 810 - -
Aed8g2166 815 Gene3D - 657 788 IPR023214 -
Aed8g2166 815 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 628 IPR023299 GO:0000166
Aed8g2166 815 Coils Coil 116 136 - -
Aed8g2166 815 Gene3D - 479 590 IPR023299 GO:0000166
Aed8g2166 815 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Aed8g2166 815 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 585 716 - -
Aed8g2166 815 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 586 - -
Aed8g2166 815 Gene3D - 114 286 - -
Aed8g2166 815 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 712 775 - -
Aed8g2166 815 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 775 810 - -
Aed8g2166 815 Pfam Phospholipid-translocating P-type ATPase C-terminal 777 809 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2166 Aed-Chr8 25968891 25977436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2166 9 810 Primary Pumps ATPases AT1G68710 55.930 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2166 K01530 - gmx:100779714 1459.89