Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2157 ATGGCAAGCACTACTTCTAGTCCTAGCATTCCATCACACGTAAAAGCATGGGTTTATTCTGAATATGGGAACATAGAAGAGATTCTCAAATTTGAATCTAACATACCTATTCCAAACATCAAGGAAGACCAGGTTCTCATCAAGGTTGTTGCTGCAGCCCTTAATCCTATAGATTATAAGAGGGCTCTTGGCTTTTTGAAGAACACTGACTCTCCCTTACCTACTGTTCCGGGGTACGATGTTGCTGGTGTGGTGGTCAAAGTGGGAAGTGAAGTGAGGAAATTCAAGGTTGGGGATGAGGTTTATGGCGATATCAATGAGGATCCTGTGAACAATCCAAAGAAGATTGGGTCTTTGGCAGAGTACACTGCTGTTGAAGAGAAAGTGTTGGCTCACAAACCCTCTAATTTGAGTTTTGTTGAAGCTGCTAGCCTTCCTTTGGCCATCATCACTGCTTATCAAGGATTTGAGAAAGTTGATTTTTCTGCTGGCAAATCTATACTTGTTCTGGGAGGTGCTGGTGGAGTTGGATCCCTTGTTATTCAGCTTGCGAAACACGTTTTTGGTGCATCAAAGGTTGCAGCCACGGCCAGTACTGCAAAACTGGATTTGTTAAGGAAGTTGGGAGCAGACTTAGCTATTGATTATACAAAAGAGAATTTTGAAGAACTGGAAGAAAAGTTTGATGTAGTGTACGACACAGTAGGAGAAAATGAGAGTGTGAAGGCACTGAAGGCTGTTAAAGAAAGTGGCAAAGTTGTGACAATAGTTCGATTTGGACCTCCTGAAGCTATATTCTTCATACGCATTTCAGATGGTGCTGTGTTGGAGAAACTGAAACCTTACTTAGAGAGTGGAAAGGTGAAGGCAATACTAGATCCTAAGAGTCCCTTTGGGTTTTCTCAGACTGTGGAGGCATTTACACACTTGAAGACTAATAGAGCTATTGGGAAAGTAGTCATACATCCCATTCCATAA 978 0.4202 MASTTSSPSIPSHVKAWVYSEYGNIEEILKFESNIPIPNIKEDQVLIKVVAAALNPIDYKRALGFLKNTDSPLPTVPGYDVAGVVVKVGSEVRKFKVGDEVYGDINEDPVNNPKKIGSLAEYTAVEEKVLAHKPSNLSFVEAASLPLAIITAYQGFEKVDFSAGKSILVLGGAGGVGSLVIQLAKHVFGASKVAATASTAKLDLLRKLGADLAIDYTKENFEELEEKFDVVYDTVGENESVKALKAVKESGKVVTIVRFGPPEAIFFIRISDGAVLEKLKPYLESGKVKAILDPKSPFGFSQTVEAFTHLKTNRAIGKVVIHPIP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2157 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 137 265 IPR036291 -
Aed8g2157 325 Pfam Zinc-binding dehydrogenase 208 321 - -
Aed8g2157 325 CDD MDR_like_2 15 321 - -
Aed8g2157 325 Pfam Alcohol dehydrogenase GroES-like domain 43 104 IPR013154 -
Aed8g2157 325 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 6 325 IPR044626 GO:0016628
Aed8g2157 325 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 164 185 IPR002364 GO:0008270|GO:0016491
Aed8g2157 325 SMART PKS_ER_names_mod 23 321 IPR020843 GO:0016491
Aed8g2157 325 Gene3D - 156 272 - -
Aed8g2157 325 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 6 325 - -
Aed8g2157 325 Gene3D - 21 321 - -
Aed8g2157 325 SUPERFAMILY GroES-like 12 169 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2157 Aed-Chr8 25877870 25879801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2157 67 320 Monolignol Biosynthesis Gene Families AT1G72680 25.260 3.59e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2157 K18980 - gmx:100793908 547.74