Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2119 ATGATATTGAGAAACCTGGGGGCATTTGAGCCTATTGTTAAAGTAGCATGGGAGTTTTCTAAGTTCTTCTGTTTTCTACATGTTGGCAATACTTATCTGTTCTCCCCTACTATGACCTTTGGTCCTAGCATGCTTCCTACAATCGATTTGCAAACAAGTGTGTTCTTAATGGAAAAGATCTCAACCCGGTTTGGTAAAGTTTCTCGTGGAGATATTGTCGTCTTGCGTGACCCTCAAGACCCTAGGCGCTTTATGACCAAACGTGTGGTTGGATTGGAGGGTGATAGCGTTACATACATTTCCAATCCTGAGAGCGATGATAAATCTGAAACGATTGTGATAATGCCACTTAAAGATTTTGGACCTTTCTGGCATAAATGA 381 0.4121 MILRNLGAFEPIVKVAWEFSKFFCFLHVGNTYLFSPTMTFGPSMLPTIDLQTSVFLMEKISTRFGKVSRGDIVVLRDPQDPRRFMTKRVVGLEGDSVTYISNPESDDKSETIVIMPLKDFGPFWHK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2119 126 CDD S26_SPase_I 35 95 IPR019533 GO:0004252|GO:0006465
Aed8g2119 126 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 114 - -
Aed8g2119 126 TIGRFAM sigpep_I_bact: signal peptidase I 24 100 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aed8g2119 126 SUPERFAMILY LexA/Signal peptidase 31 100 IPR036286 -
Aed8g2119 126 PRINTS Bacterial leader peptidase 1 (S26A) family signature 32 48 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aed8g2119 126 PRINTS Bacterial leader peptidase 1 (S26A) family signature 85 97 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aed8g2119 126 Pfam Signal peptidase, peptidase S26 23 99 IPR019533 GO:0004252|GO:0006465
Aed8g2119 126 Gene3D Umud Fragment, subunit A 30 119 - -
Aed8g2119 126 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2119 Aed-Chr8 25517645 25521292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2119 44 114 MADS-box Gene Family AT1G29960 45.070 9.25e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2119 K09647 - gmx:100805997 173.711