Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2097 ATGGAGTCAGGTCCTCCGGCTCACGATTTGTGTTCGGTGTGCCATGGAAACTTCCATATTCCCTGCCAGGCCAATTGTTCTCACTGGTTTTGCGGAAATTGCATAATGCTGGTGTGGCAGCACGGATCAGTGGCTAGGCCTTGCAAGTGCCCCCTGTGTCGGCGAGACATCACACTCCTAGTCCCGACGGAAGAGCGGCATGAGCTTGAGCATGAACCCGAAGTCGGTGAGATTCTGAGGAAGGTTCATGCCTATAACCGCTTCTTCGGTGGCCAAGCCACCAGTGTTAATCAGAGACTGCGAGATCTTCCATTTCTCTTGCACCGCCTTCTCAGGGAATTCCTCGACCCTCACAGATCCCTTCCTCTCGTCGTTCGTGCTCGCGTCTTTCTAGCTGTCAGGATATTAGGAGTGGTGGGTTTGTTGGATGATCTCCTAATTGTGCTGATGTGTTTCCTACATGTTGCTGCCCTTTATAGATCAGTACTCTACCTCCGTCATGGGGGTGGTTCCTGA 516 0.5233 MESGPPAHDLCSVCHGNFHIPCQANCSHWFCGNCIMLVWQHGSVARPCKCPLCRRDITLLVPTEERHELEHEPEVGEILRKVHAYNRFFGGQATSVNQRLRDLPFLLHRLLREFLDPHRSLPLVVRARVFLAVRILGVVGLLDDLLIVLMCFLHVAALYRSVLYLRHGGGS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2097 171 ProSiteProfiles Zinc finger RING-type profile. 11 54 IPR001841 -
Aed8g2097 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 102 IPR013083 -
Aed8g2097 171 PANTHER UNCHARACTERIZED 6 170 IPR038896 GO:0061630
Aed8g2097 171 SUPERFAMILY RING/U-box 10 63 - -
Aed8g2097 171 PANTHER BNAC07G13660D PROTEIN 6 170 - -
Aed8g2097 171 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2097 32 170 C3H Transcription Factor Family AT1G22510 60.645 4.11e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2097 K15707 - gmx:100306204 252.292