Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2090 ATGGGAGGGATAATGGCGAAGATGAATAGAGAGAGAATGATAACGTTACGCGAAGGAACCCTCAATCTCAACGCTCTTCCTGTTCGTGATCTTGAACTCTGCAGCATCATTGCTACCTATACTCAATGCTACTTGGACCTTGAAAATATGAAAGTAATAAGCTTTTCTGGTGGCATAATAACAAAACCCACTTTTGTGATTGGCCAAACAGAAATGCCTATTCTAACATTTGGTCATTGTAAGCTGGGTGCTACCCTAGCTCTTAGGAGGATGGGGTTGATTACGAAACTTCAATATTCTGTTTCCGATAGGACATTCACTTCTGGTTCCGTGGATTCGCCGGCGTCCAAAACGGACTCTGGTAGAATGAATCGGAGGCAGGGAGGCTCCTCGTCAATATATAGCCGTCCTAGTTTGTCAGAAATGAAGAAGGAGAAGGCAGCAATAAGGGAAAAGGTTTACAAGTTCTTAAGCACAATTGGCATTGTTCCTGATGAGCTTGATGGTCTTGAACTTCCTGTGACTGTTGATGTTATGAGAGAGCGTGTAGATTTTCTTCATAGCTTGGGGCTTACAATTGAAGACATCAACAACTATCCACTTGTTCTTGGCTGCAGCGTCAAGAAGAACATGATTCCTGTGCTTGATTACCTTGGAAAATTGGGAGTGAGGAATTCCACGATTACGCAGTTCTTGCAGAGATACCCACAAGTGCTGCATGCTAGTGTGGTTGTGGATCTTATGCCAGTGGTCAACTATCTTAAGGGGATGGATATCAAGCTCAATGATATTCCTCGTGTTCTTGAGAGGTACCCTGAACTGCTTGGCTTCAAACTTGAGGGAACCATGAGCACATCGGTTGCTTATTTGATTGGAATTGGTTTAGGAAGAAGAGAAATCGGAGGTGTCTTAACTAGATACCCAGAGATTTTGGGGATGCGAGTTGGTAGAATCATCAAGCCTTTTGTGGAATATCTGGAGAGCTTGGGAATTCCAAGGTTAGCCATTGCTAGACTGATAGAGCAACGACCTTATATTCTTGGATTTGGGCTGGATGAGAAGGTGAAGCCAAATGTTAAATCCCTTGAAGAGTTTAATGTTAGGAGAACATCACTTTCGTCTATAATTGCTCAATATCCTGACATCATTGGAACTGACTTGAATCCAAAGCTGGTAAAACAGAGAAGTTTACTCAATTCTGTTATTGATTTGGATCCGGAGGACTTTGGCCGAGTTGTTGAGAAGATGCCGCAAGTAGTTAGCCTCAGCAGTGGACCTATGCTGAGGCATGTCGATTTTCTTAAGGATTGTGGCTTTTCCTTGCCACAAATGAGGAAGATGATTGTTGGATGCCCTCAATTACTTGCTTTACACATTGACATTATGAAGCTTAGCTTTGATTACTTCCAAATGGAGATGAAAAGGCCTTTGGAAGACTTGGTTTCTTTCCCTGCATTCTTCACTTACAGTTTGGAGTCAACTATAAAACCTAGGCATAGGATGGTTGTCATGAAAGGGTTGAAGTGTTCTCTGTCATGGATGCTTAATTGTTCTGATGAGAAATTTGAGCAACGAATGGACTATGACACTATTGACATGGAAGAGATGGAAATGGAACCGTCATTTGACATGAATTCACTGATGCAACCAAGAAGTGATGAAGAATCAGATTTTGATTATGAAGACAGTGATGATGAAGATTATGAGTAG 1710 0.4187 MGGIMAKMNRERMITLREGTLNLNALPVRDLELCSIIATYTQCYLDLENMKVISFSGGIITKPTFVIGQTEMPILTFGHCKLGATLALRRMGLITKLQYSVSDRTFTSGSVDSPASKTDSGRMNRRQGGSSSIYSRPSLSEMKKEKAAIREKVYKFLSTIGIVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRNSTITQFLQRYPQVLHASVVVDLMPVVNYLKGMDIKLNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGLGRREIGGVLTRYPEILGMRVGRIIKPFVEYLESLGIPRLAIARLIEQRPYILGFGLDEKVKPNVKSLEEFNVRRTSLSSIIAQYPDIIGTDLNPKLVKQRSLLNSVIDLDPEDFGRVVEKMPQVVSLSSGPMLRHVDFLKDCGFSLPQMRKMIVGCPQLLALHIDIMKLSFDYFQMEMKRPLEDLVSFPAFFTYSLESTIKPRHRMVVMKGLKCSLSWMLNCSDEKFEQRMDYDTIDMEEMEMEPSFDMNSLMQPRSDEESDFDYEDSDDEDYE 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2090 569 MobiDBLite consensus disorder prediction 105 135 - -
Aed8g2090 569 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 373 405 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 477 508 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 445 476 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 410 440 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 MobiDBLite consensus disorder prediction 542 569 - -
Aed8g2090 569 Pfam mTERF 215 523 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 PANTHER CGI-12 PROTEIN-RELATED 114 556 IPR003690 GO:0003690|GO:0006355
Aed8g2090 569 Gene3D Transcription termination factor 3, mitochondrial 317 532 IPR038538 -
Aed8g2090 569 Gene3D Transcription termination factor 3, mitochondrial 130 243 IPR038538 -
Aed8g2090 569 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 114 556 - -
Aed8g2090 569 MobiDBLite consensus disorder prediction 555 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2090 Aed-Chr8 25207808 25210234 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed8g2090 mTERF 1.2e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2090 K15032 - gmx:100785223 898.271