Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2069 ATGTCGATGATGGTGCTGAGGAAAGTGTGGGAAATGGTGTCGTGGAGATCTGATTCATCAACGTCGTCGTCATCATCATCACCAGAAGTGGCACGTTCTGACATGGGTGAGTTGGAGTTGCTACCCAGTGACATCTTGATGCAAATTCTAAGACTTTTGGGTCCAAAAGAGGCTGCGAAGTTGAGTGTGGTTTGCATGGCTTTGAGATCCCTTGTGTTTGATAACAGACTTTGGATTCACTTTCTTCACACCCATCAGGCTCAACCCTCTGGGGATTCTGCTTTCTTTGCTGAGACCAACTTGAGCTATAGCTACCCTCTTCCGCCCTTTGCTGGCCATTGGCCCCATCTATCATTCAAGCATATTTATGGCCAGAGAGCACAAGTTCCTGGTTCTATTATCATTGATGGTGGTTCTGGCTATTGCAAATTTGGTTGGAGCAAATATGCATGTCCATCAGGGCGATCAGCAACATTTTTGGAATTTGGTAACATTGAGTCACCAATGTATACTAGGCTTCGACTTTTTTTTGCAACTATTTATAACAGGATGCAGGTGAAACCGAATAAACAACCAGTTATTGTTTCTGTACCAATATGTCATTATGATGATACCGAATCAGCCAAAGCATCGAGACAACAGCTTAAAGAGGCAATTTATGCTTCCTTGTTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCCACTCTAGCTCTGTATGCTGCGAAACGAACTTCTGGAATAGTAGTTAATATAGGTTTTCAAGTCACATCTATAGTTCCAATTTTAAATGGTAAAGTAATGCGCAAGGTGGGTGTGGAAGTTTTGGGGCTGGGAGCACTGAAACTTACAGGATTTCTTAGGGAGAAGATGCAACTGAATAACTTAAGTTTTCAATCTTTGTACACTGTTCGCACATTGAAAGAGAATCTATGCTATGTTGCGCTTGATTATGAAGCTGAGTTATTGAGTGATACAAAAGCATCATTTGAAGCTGCAGGAGAAGGATGGTTTACCCTTTCAAAAGAGAGGTTTCAGACAGCAGAGATCCTATTCCAGCCACATCTTGCCGGAGTGCAAGCTATGGGTCTGCACCAAGCCATAGCTCTTTGTGTGGAACATTGCCATTCTGCAGATTTAGCAGGTGATAGTGATTGGTATAAGACTATATTGAGCACCTTTCCTGGTCATTGGTGTGTCACAAAAAAGCAGTTCCGTCAGAAGCCTAGACTCAGCCTCATATGGTGA 1254 0.429 MSMMVLRKVWEMVSWRSDSSTSSSSSSPEVARSDMGELELLPSDILMQILRLLGPKEAAKLSVVCMALRSLVFDNRLWIHFLHTHQAQPSGDSAFFAETNLSYSYPLPPFAGHWPHLSFKHIYGQRAQVPGSIIIDGGSGYCKFGWSKYACPSGRSATFLEFGNIESPMYTRLRLFFATIYNRMQVKPNKQPVIVSVPICHYDDTESAKASRQQLKEAIYASLFDMNVPAVCAVNQATLALYAAKRTSGIVVNIGFQVTSIVPILNGKVMRKVGVEVLGLGALKLTGFLREKMQLNNLSFQSLYTVRTLKENLCYVALDYEAELLSDTKASFEAAGEGWFTLSKERFQTAEILFQPHLAGVQAMGLHQAIALCVEHCHSADLAGDSDWYKTILSTFPGHWCVTKKQFRQKPRLSLIW 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2069 417 Gene3D - 129 246 - -
Aed8g2069 417 SUPERFAMILY Actin-like ATPase domain 132 252 IPR043129 -
Aed8g2069 417 PANTHER MACRONUCLEAR ACTIN 84 393 - -
Aed8g2069 417 ProSiteProfiles F-box domain profile. 35 81 IPR001810 GO:0005515
Aed8g2069 417 CDD NBD_sugar-kinase_HSP70_actin 133 278 - -
Aed8g2069 417 PANTHER ACTIN 84 393 IPR004000 -
Aed8g2069 417 SUPERFAMILY Actin-like ATPase domain 246 382 IPR043129 -
Aed8g2069 417 Pfam Actin 175 379 IPR004000 -
Aed8g2069 417 Gene3D - 249 392 - -
Aed8g2069 417 Pfam F-box-like 40 80 IPR001810 GO:0005515
Aed8g2069 417 Gene3D - 25 128 - -
Aed8g2069 417 SUPERFAMILY F-box domain 27 89 IPR036047 GO:0005515
Aed8g2069 417 SMART actin_3 130 407 IPR004000 -
Aed8g2069 417 Gene3D Actin; Chain A, domain 4 282 360 - -
Aed8g2069 417 SMART fbox_2 41 81 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2069 Aed-Chr8 25044477 25052442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2069 174 398 Cytoskeleton Gene Families AT3G12110 31.381 1.46e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2069 K16616 - gmx:100791973 737.258