Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g2025 ATGGGATTCTATCTTAATCTCAAACTCAAGGCGTTCCGGTTGAAACGGTTTCTGCTAGGACCGGGAGCTAGAAAAAGAAAGCACAAGCAGGCAAATAAGCCTTCATGGATGATGCCAGTGACATATGGTTATCAAGTGGTGGAGCATAATCTGAGAAGAGATGATTCTGATGACTCAGACTTTGATTCAGTTGTGGCGCAGAGAGAGCAAATGGATCACACAGAATTGTGGTATTTTGGAATCTTTGACTCACTAATTGGAGACAAGGTTACCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGAGTCATATAAGGAGAAAAGGCAAGGAAGCTCTGAAGAGAGCTTACCTTGGTGTAAAAGCAAAGATCAGAGAGGAAAACAAATTAGAGGAGACATGCAGAATGGGGTCAGCATCTGTTATGCTGATCAATGGAGAAAAACTTGTAGTAGCCAACATGGGAGATTACAGAACTGTTGTGTGCAGAGATGGCATAGCTCATCAGACAACTGGCACATATCAACAATCAGCAAAAATACATTGGTCTCGCAGACTCTTCGCAGCATGTCAATCAGGAGATGCAGCAGGTGCAAAGCATTCCAGAGGCTCTGATCTTGTCGTTAGAAGTGAACGGATCGATTCTGATACCGAGTTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAAGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTCTAATTAGGATGAGCAAAAGCAGCATCTCATGCATAATCATTCGCTTTGACTGA 834 0.4269 MGFYLNLKLKAFRLKRFLLGPGARKRKHKQANKPSWMMPVTYGYQVVEHNLRRDDSDDSDFDSVVAQREQMDHTELWYFGIFDSLIGDKVTKYMQSHFFDKKLQESHIRRKGKEALKRAYLGVKAKIREENKLEETCRMGSASVMLINGEKLVVANMGDYRTVVCRDGIAHQTTGTYQQSAKIHWSRRLFAACQSGDAAGAKHSRGSDLVVRSERIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSKSSISCIIIRFD 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g2025 277 SUPERFAMILY PP2C-like 66 277 IPR036457 -
Aed8g2025 277 Pfam Protein phosphatase 2C 213 267 IPR001932 -
Aed8g2025 277 Pfam Protein phosphatase 2C 51 179 IPR001932 -
Aed8g2025 277 Gene3D - 24 179 IPR036457 -
Aed8g2025 277 SMART PP2C_4 25 274 IPR001932 -
Aed8g2025 277 CDD PP2Cc 78 263 IPR001932 -
Aed8g2025 277 Gene3D - 206 277 IPR036457 -
Aed8g2025 277 ProSiteProfiles PPM-type phosphatase domain profile. 58 276 IPR001932 -
Aed8g2025 277 PANTHER ALPHABET, ISOFORM E-RELATED 5 276 - -
Aed8g2025 277 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g2025 Aed-Chr8 24673903 24675621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g2025 1 276 PP2C-type Phosphatase Gene Family AT3G23360 48.921 1.45e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g2025 K19704 - gmx:100785227 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g2025 8 24673903 24675621 Aed8g2025 8 24673903 24675621 ECH