Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed8g2005 | ATGATGCAAAACTGGCGTTTTGGTGACATGCACCATGCGAGCTACGTGAGTACGGAGGTGCCTTTGTTGTTGTTTGTTTACGAGAGTGTGTTCTTATTGTTATATATAAAGACAATAACAATGACAATGAGAGGGGCGAAGCTTAGCTATGAGAAGCTCTCAGCATGCTTGACGTGTCCTTTGTGCAATAGATTTTTCAGAAACGCCACCACAATATCAGAATGCTGCCATAGTTTGAATATTGTTCATTATTTTTCTTTTCCATCTACCTTTATGGAATGCATAGACAAGAAGTTAATAGATGAGAAATTAATGCACTGTCCAATATGCAATAGAGACTTGGGTTGTTCTCCACTCGATAAATTAAGGTCAGATCCCTGTCTGCAAGATTTGAGGGATAAAATTTTCCCATTCGAAGAACAAAAAGCTTCAGTCAAATTGAACATAAAAAGAAAGAAGAATTCTCTATCAATAGAAAAAGCTGCTGCTTCAAAACCTGATAAAGCAGAAGATGAAAACCATGGTGGAGTAGAAATTGTTCTGGAAGAAGCTTCTAGTTCTACAATAGGATCCGCAAGAAGAGCCAGAGCTGCAGCTAGAGCCAAATTCACTTGCTCAGCATCACCATCTCCTTCTTGTCAACTTGGCAAAGTAGTAGCAGAAGAAGAAAAGAAAGATGGTGGTCGTCCCCGGGTTGAAACTTCGAACGGAAGTCTCAGAATCAAAATTCCGGTAAAGAGTTCAAGTCAACAATCAGAGGCCAACAAGAGGGACAGTGCTGAGTTTAGGAATAAAACGGATGATGATGATGATATGTCTCAACCATTAAATTCCCTGGTGGAATCTGCAAGCAAAAAGTCTCGTAGAAAGTCCACCATGCAAGAAAATTGTGTTGTAGTTGTGCGCTCCAATGACAATGCTACTGATCAAAATGAACCAACTCCTTCAAACTCTGATTCAGTCCAACACCACCAAGAGAAAAAACTCAGAATCTCTGAGGACTTGAATTTTCCTGCACAACCTGAGGTTGGTTCCAACAAAGGATTTGGTCCAATATGGTTCTGCTTGGTTGCTGCTGAAGAGAAGGCAGCAAGTGTACAGTTGCCACAATTATCTTCCAGCTACCTAAGGGTGGAGATCACATTACAAGGGCGAGCACTTTTATCTTCATTGCAACTCAGAAACATAGTAGACATGTGGTTGCAAACAGTGCCACAGAATGAGATTAAAACATCTGTTGGAAGCTCAGCCAAGGATTTTATTATGGTCCTTTCATATGGTCGAAAGCCTTAA | 1293 | 0.4053 | MMQNWRFGDMHHASYVSTEVPLLLFVYESVFLLLYIKTITMTMRGAKLSYEKLSACLTCPLCNRFFRNATTISECCHSLNIVHYFSFPSTFMECIDKKLIDEKLMHCPICNRDLGCSPLDKLRSDPCLQDLRDKIFPFEEQKASVKLNIKRKKNSLSIEKAAASKPDKAEDENHGGVEIVLEEASSSTIGSARRARAAARAKFTCSASPSPSCQLGKVVAEEEKKDGGRPRVETSNGSLRIKIPVKSSSQQSEANKRDSAEFRNKTDDDDDMSQPLNSLVESASKKSRRKSTMQENCVVVVRSNDNATDQNEPTPSNSDSVQHHQEKKLRISEDLNFPAQPEVGSNKGFGPIWFCLVAAEEKAASVQLPQLSSSYLRVEITLQGRALLSSLQLRNIVDMWLQTVPQNEIKTSVGSSAKDFIMVLSYGRKP | 430 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed8g2005 | 430 | MobiDBLite | consensus disorder prediction | 293 | 320 | - | - | |
Aed8g2005 | 430 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED | 378 | 429 | - | - | |
Aed8g2005 | 430 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED | 46 | 378 | - | - | |
Aed8g2005 | 430 | MobiDBLite | consensus disorder prediction | 206 | 328 | - | - | |
Aed8g2005 | 430 | MobiDBLite | consensus disorder prediction | 256 | 272 | - | - | |
Aed8g2005 | 430 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 378 | 429 | IPR044807 | GO:0004842 | |
Aed8g2005 | 430 | MobiDBLite | consensus disorder prediction | 240 | 255 | - | - | |
Aed8g2005 | 430 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 46 | 378 | IPR044807 | GO:0004842 | |
Aed8g2005 | 430 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 43 | 164 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed8g2005 | Aed-Chr8 | 24539831 | 24543083 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed8g2005 | 46 | 378 | C3H Transcription Factor Family | AT2G30580 | 28.134 | 7.56e-31 | 119 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed8g2005 | K16277 | - | gmx:102669950 | 380.178 |