Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1998 ATGGAACCGCCATTGCCGCAACCGCCACCACGCACCACCACCATCCTCGGGAAGTACCATCTCACGCGCTTCCTCGGCCGCGGCAGCTTCGCCAAGGTCTACCAGGGGCGATCCGTCTTCGACGGAACCACCGTCGCCGTCAAAATCATCGACAAATCGAAAACTGTGGACGCCGGGATGGAGCCACGCATAATCCGTGAGATCGACGCCATGCGCCGCCTCCACCACCACCCTAACATCCTCAAAATCCACGAGGTGCTGGCCACCAAGACCAAGATCCACCTCGTCGTTGAGCTCGCCGCCGGCGGCGAGCTCTTCGCCAAAATCTCCCGCCGCGGAAAGTTACCGGAGTCCATCGCGCGCCGCTACTTCCAGCAACTCGTCTCCGCGCTCCGGTTCTGCCACCGCAACGGCGTGGCGCACCGCGACCTGAAGCCGCAGAACCTCCTCCTCGACGGCGACGGCAACCTCAAGGTCTCCGACTTCGGCCTCTCCGCGCTGCCGGAGCAGCTCAAGAACGGCCTCCTCCACACCGCCTGCGGAACGCCGGCATACACCGCGCCGGAGATTCTCCGCCGGAGCGGCGGCTACGACGGGTCCAAGGCCGACGCCTGGTCCTGCGGCCTCATCCTCTTCGTCTTCCTCGCCGGATACCTCCCGTTCGACGACACCAACCTTCCTGCCATGTTCAAGAAGATCTCCCGCCGAGATTACCAGTTCCCGGACTGGATTTCAAAACCGGCCCGTCTCGTTATCCACAAACTACTCGACCCGAATCCGGAAACCCGAATGGGCCTGGAGGCCCTGTTCGGGAACGCGTGGTTTAAGAAATCATTAAAACCGGAAACGGCGGAGGAAAACACGTTCGGGTTCGGGTGGGATAATGTTTATGGGTGTAAAAAAAGTTCGGGTGTGATCGCGTTTGATATAATATCGATGTCTTCGGGTTTGGATTTGACGAGGTTGTTCGAAACGACGACGTTGGATATGGGGAGTAAGAGAGAGAAGAGGTTCACTTCAAGTGCGAGAGTTGAGGTGGTGGAGGAGAAGGTGAAGGAAGTGGGTGGGGTATTGGGGTTTAGGGTTGAGGTTGGGAAGAGCAACGGTGCAATTGCGTTTGTGAAAGGGAAAGTGGCTTTGGTTTTTGAGGTGCTTGAGATTGTGCCCGATGAACTTGTTTTGGTAGCTGTTAAGGTGGTCGAGGGTGTGTTGGAGTTTGAGGAACATCATTGGGGGGATTGGAAAGATGCGTTGCAACATCTCGTCCTCTCTTGGCACAACGAAGAATCATCATCATCGTGA 1302 0.5745 MEPPLPQPPPRTTTILGKYHLTRFLGRGSFAKVYQGRSVFDGTTVAVKIIDKSKTVDAGMEPRIIREIDAMRRLHHHPNILKIHEVLATKTKIHLVVELAAGGELFAKISRRGKLPESIARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDGDGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILRRSGGYDGSKADAWSCGLILFVFLAGYLPFDDTNLPAMFKKISRRDYQFPDWISKPARLVIHKLLDPNPETRMGLEALFGNAWFKKSLKPETAEENTFGFGWDNVYGCKKSSGVIAFDIISMSSGLDLTRLFETTTLDMGSKREKRFTSSARVEVVEEKVKEVGGVLGFRVEVGKSNGAIAFVKGKVALVFEVLEIVPDELVLVAVKVVEGVLEFEEHHWGDWKDALQHLVLSWHNEESSSS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1998 433 Pfam Protein kinase domain 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1998 433 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Aed8g1998 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Aed8g1998 433 SUPERFAMILY Protein kinase-like (PK-like) 15 283 IPR011009 -
Aed8g1998 433 CDD CIPK_C 307 419 - -
Aed8g1998 433 ProSiteProfiles Protein kinase domain profile. 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1998 433 Pfam NAF domain 307 363 IPR004041 GO:0007165
Aed8g1998 433 Gene3D Transferase(Phosphotransferase) domain 1 10 297 - -
Aed8g1998 433 SMART serkin_6 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1998 433 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 428 - -
Aed8g1998 433 Gene3D Kinase associated domain 1, KA1 304 423 - -
Aed8g1998 433 PANTHER SERINE/THREONINE KINASE 11 428 - -
Aed8g1998 433 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1998 Aed-Chr8 24442986 24444287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1998 1 427 CBL-interacting serine-threonine protein kinases AT4G14580 58.565 1.95e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed8g1998 Pkinase 9.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1998 K12761 - gmx:100784173 751.125