Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1983 ATGGAGGGAAGAGAAAATTTTGGTGTTGTGGTGGGTGATGAGGCACCAGAGAGCTTCCATGTAGCTCCTAGAATTGAGAATAACTTGGACTTTTCAAGGGCCACCGTGCCGGTGCCGGCGCCGGCGACGGATGGGAAAAAGAAGAGAGGGAGGCCGAGAAAGTATGGGCCGGACGGGAAGCCGGCGGCGGGGGTGGTGACGGCGCTTTCGCCGATGCCGATTTCGTCGTCGATTCCGTTGACCGGTGAGTTCTCCGCTTGGAAGAGGGGTAGAGGGAGGCCTGTTGAATCTATTAAGAAGTCATCGTTTAAGTTTGAGGTTGAAAGCCCAGGACCAGGTGAGGGAATAGCATACTCAGTTGGTGCCAATTTCACACCACATGTGCTCACAGTAAATTCTGGCGAGGATGTCACTATGAAGATTATGTCCTTTTCTCAACAAGGATCACGTGCTATATGCATTCTCTCAGCAACTGGGACAATTTCAAATGTTACACTTCGTCAACCGTCTTCTTGTGGGGGTACTTTAACGTATGAGGGACAGTTTGAGATTCTTTCCTTGTCTGGTTCTTTTATGCCAACTGAGAATGGAATTACAAGAAGCAGATCTGGTGGGATGAGCGTCTCTTTGGCTGGTCCAGATGGTCGAGTAATGGGGGGCGGCCTTGCCGGTTTGTTGGTAGCTGCTGGTCCAGTGCAGGTCGTGGTGGCCAGTTTTCTTCCTGGTCACCAGTTGGAGCATAAAACCAAGAAGCAAAGGGTGGAGCATATATCAACAACTATTAGCCCTTCACCTGTTAATCTTATCACTAGTGAGGAAATAAAAGTCAGTTTTGGTGGAGTAAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAATATTGTTTCTTTTAATAATGGTCAAGACTCTAGGAACTCATCTGCTGATGATGACAAAGATCCTTTACCTGAAAAGGAGTCTAACCTGAGCCAATCAAATGCTGAGGCTGCATGCTAA 999 0.4795 MEGRENFGVVVGDEAPESFHVAPRIENNLDFSRATVPVPAPATDGKKKRGRPRKYGPDGKPAAGVVTALSPMPISSSIPLTGEFSAWKRGRGRPVESIKKSSFKFEVESPGPGEGIAYSVGANFTPHVLTVNSGEDVTMKIMSFSQQGSRAICILSATGTISNVTLRQPSSCGGTLTYEGQFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEHKTKKQRVEHISTTISPSPVNLITSEEIKVSFGGVKPIMTPAAFQEENIVSFNNGQDSRNSSADDDKDPLPEKESNLSQSNAEAAC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1983 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 9 319 - -
Aed8g1983 332 MobiDBLite consensus disorder prediction 32 63 - -
Aed8g1983 332 ProSiteProfiles PPC domain profile profile. 121 264 IPR005175 -
Aed8g1983 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 242 - -
Aed8g1983 332 CDD DUF296 125 239 IPR005175 -
Aed8g1983 332 SMART AT_hook_2 88 100 IPR017956 GO:0003677
Aed8g1983 332 SMART AT_hook_2 46 58 IPR017956 GO:0003677
Aed8g1983 332 MobiDBLite consensus disorder prediction 297 332 - -
Aed8g1983 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 239 IPR005175 -
Aed8g1983 332 Gene3D - 126 259 - -
Aed8g1983 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 319 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1983 Aed-Chr8 24327687 24333637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1983 46 316 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 56.940 4.23e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1983 - - gmx:100789179 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1983 8 24327687 24333637 Aed7g0475 7 3381434 3386080 ECH
Aed8g1983 8 24327687 24333637 Aed8g1983 8 24327687 24333637 ECH
Aed7g0475 7 3381434 3386080 Aed8g1983 8 24327687 24333637 PCT