Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1977 ATGGGGTTTTCAGCACTGCTGCTTTCGTTTTCTCTTGTGTTTTTGCTCTCAAACCCAACATGGGTGTGTGGGAATGGAGAGTTAAGAGCACTGATGGATATGAAGGCCAGTTTGGACCCAGATAGCCTTTATCTACCCTCTTGGAGTGTCAATGGTGACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGAGAAGGGCCACGTGGCAAACGTTTCTCTGCAAGGAAAGGGTCTCTTAGGGAAGCTTTCACCAGCCACTGCTGGTCTCAAGCACTTGACTGGACTTTACTTGCATTATAACTCTTTGTATGGAGAGATACCAAGAGAGATTGCAAACTTGACTAAGCTTGTTGACTTGTACTTGAATGTGAATAATCTGTCCGGGGAAATCCCTCGTGAAATCGCCAGAATGGAGAACTTGCAGGTTTTGCAGCTTTGCTATAATCAGTTGACCGGAAGCATTCCTACACAGCTTGGTGCTTTGGAAAAGCTGAGAGTTGTTGCTTTGCAGTCAAACAATTTAACTGGTGCCATACCTGCTAGTCTAGGTGATTTGGGTATGTTGGTGAGGATAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCACTAGCCTAGCTGATGCTCCTTCACTGATGGTTTTGGATGTTCACAACAACACCCTTTCTGGGAATGTACCACCTGCTCTCAAGAGACTAGATGATGGATTTCTGTATGAGTACAATCTGGGGTTATGTGGAGTTGGGTTTTCATCACTGAAAGCTTGCAATGCTTCGGATCATGTCAATCCTAGCAGACCCGAACCTTATGGAGCGGCCACAAGAGATATTCCAGAAACTGCGAATGTGAAGTTACCTTGCAATGGAACTCGGTGCCTTAGTTCATCAAAATCCAACCAGTCCACTACATCAGTTACTGTTGGCGTATTTGTGGTTATAATTGCACTGTTTGCAATTGGTGTTTTGACATTCACATTATATCGTCGAAGGAAACAAAAGCTTGGAGGTTCTTTTCATATCAGTGACAGTCATCTAAGTACCGATGAAGCCATGGTTGCATATAGGAAAAACGGATCTCCTTTGGCTAGTCTTGAGTACTCTACTGGATGGGACCCTTTGGCTGATAGTAGGAATTTCAATGGCTATAGCCAAGATATGTTCCAGGGTTTGAGGTTCATCTTGGAGGAAGTGGAGTCAGCTACACAGTATTTCTCAGAGTTGAATCTGTTGGGTAGGAATAGCTTTAGTTCAACATATAGAGGAGTTTTAAAAGATGGATCCGTTGTTGCTGTGAAGAGCATTGGCAAAACTAGTTGCAAGCCAGACGAAGCTGAGTTTATGAAGGGATTGCACTTGTTGACCTCACTGAGGAATGATAATGTGGTGAGGTTGAGAGGTTTTTGTTGTTCAAGGGGACGAGGTGAATGCTATCTGATCTATAATTTTGTTCCTAATGGAAACCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAAAGCAAACAAACCCGTTTTGGTTCACCAAAACATCTCAGCTGACAAAGTTCTCATTGATCAGCGGTACAATCCATTGCTAGCAGATTCTGGCTTGTACAAGCTTCTCACTAATGACATTGTCTTCTCCGCGCTGAAGGGTAGTGCAGCAAAGGGTTACTTGGCGCCTGAATATGCGACTACTGGCTGGTTTGCTGAGACAAGTGATGTTTATGCATTCGGGGTGCTGCTTTTCCAGATCCTTTCAGGGAAGCATGAGATTACTAGCTCAATAAGGCTTGCTGCAGAGTCCTCCAAGTTCCAAGAATTTATGGACCCAAATCTCCATGGAAGATACTTCGAATATGAAGTGGCTAAGCTGGCAAAGATAGCTTTGCTTTGCTCCCATGAGTCTTCATTTGAGAGGCCATCCATGGAAGCCATTGTTCAAGAACTGGGGAATTGTAGTAGTTGTCTCTGA 2037 0.4359 MGFSALLLSFSLVFLLSNPTWVCGNGELRALMDMKASLDPDSLYLPSWSVNGDPCDGSFEGVACNEKGHVANVSLQGKGLLGKLSPATAGLKHLTGLYLHYNSLYGEIPREIANLTKLVDLYLNVNNLSGEIPREIARMENLQVLQLCYNQLTGSIPTQLGALEKLRVVALQSNNLTGAIPASLGDLGMLVRIDLSSNNLFGSIPTSLADAPSLMVLDVHNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKACNASDHVNPSRPEPYGAATRDIPETANVKLPCNGTRCLSSSKSNQSTTSVTVGVFVVIIALFAIGVLTFTLYRRRKQKLGGSFHISDSHLSTDEAMVAYRKNGSPLASLEYSTGWDPLADSRNFNGYSQDMFQGLRFILEEVESATQYFSELNLLGRNSFSSTYRGVLKDGSVVAVKSIGKTSCKPDEAEFMKGLHLLTSLRNDNVVRLRGFCCSRGRGECYLIYNFVPNGNLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVLVHQNISADKVLIDQRYNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGWFAETSDVYAFGVLLFQILSGKHEITSSIRLAAESSKFQEFMDPNLHGRYFEYEVAKLAKIALLCSHESSFERPSMEAIVQELGNCSSCL 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1977 678 Pfam Protein tyrosine and serine/threonine kinase 410 671 IPR001245 GO:0004672|GO:0006468
Aed8g1977 678 Gene3D Ribonuclease Inhibitor 21 266 IPR032675 -
Aed8g1977 678 ProSiteProfiles Protein kinase domain profile. 406 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1977 678 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 6 676 - -
Aed8g1977 678 Gene3D Phosphorylase Kinase; domain 1 376 484 - -
Aed8g1977 678 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Aed8g1977 678 Gene3D Transferase(Phosphotransferase) domain 1 485 677 - -
Aed8g1977 678 SUPERFAMILY Protein kinase-like (PK-like) 381 671 IPR011009 -
Aed8g1977 678 CDD TM_EGFR-like 300 335 - -
Aed8g1977 678 SUPERFAMILY L domain-like 23 233 - -
Aed8g1977 678 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 676 - -
Aed8g1977 678 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1977 Aed-Chr8 24280484 24284725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1977 12 519 Miscellaneous Gene Families AT4G22730 55.172 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aed8g1977 PK_Tyr_Ser-Thr 2.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1977 - - gmx:100775422 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0467 7 3330954 3334979 Aed8g1977 8 24280484 24284725 PCT