Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1970 ATGGGTTCAATGAATAATAACCAAAATGAAAATGAGCTCTTAGAAGGCCAAGCTCTTTTGTACATGCAGCTATTTGCATACCTAAGACCTATGTGTCTTAAGTGGGTTGTGCAACTAGGTATTCCAGACATAATACAAAATCATGCCAAACCCATTACTCTTTCTGAGTTGGTCTCAACTCTTCAAATTCCACCAGCTAAGGCTTGTTTGGTGCAGCGGTTCATGCGATTTTTGGCACACAATGGAATCTTTGATATCCATGAGAGCCAAAAAGAAGATCATGAATTGGCATATGCTCTAACCCCTGCTTCAAAGCTTCTAGTGAGTGGCAGTGACCACTGTTTATCTCCAATGGTTCTGTTGAATACTGATCCACTTGTGACGAGTACATACCATCACTTAGGGGAATGGATTCGTGGGGAGGACCCCACATTATATGAGACAGCCTTAGGAACAACCATCTGGGGACTTTTTGAGGAAAAACCAACATATATGAGTCTCTTCAATGAGGCTATGGCTAGTGATTCTCAAATGGTAGACTTGGCACTCAAAAATTGCACTTCGGTTTTTGAGGAGCTAGATTCCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCCAGAATTATCTGTGAGGCATTTCCTAAGTTGAAATGTGTTGTGCTTGACCTTCCTCATGTTGTTGCAAACTTGAAAGGAAGTAATAATTTGAGTTTTGTTGGTGGTGACATGTTTAATTCTATCCCTCAAGCTGATGCAATTCTCCTTAAGTGGGTTTTACATGATTGGAATGACGAAAATTGCATAAAGATTCTGCAACAGTGTAGAGATTCTATTGTAAGCAAAGGCAGCATAGGGAAAGTGATTATCATAGATGCAGTAATAAATGAGAAGCTAGATGACCGGAATATGACTCAAACAAAGCTTAGTTTAGATATAATCATGTTGACTATGAATGGAAGAGAGCGAACTGAAAACGAATGGAAACAACTCTTCATTGAAGCTGGATTCAAACACCACAAAATATTTCCCTTATTTGGTTTTAGATCTCTCATTGAGGTATTTCCCTAA 1071 0.395 MGSMNNNQNENELLEGQALLYMQLFAYLRPMCLKWVVQLGIPDIIQNHAKPITLSELVSTLQIPPAKACLVQRFMRFLAHNGIFDIHESQKEDHELAYALTPASKLLVSGSDHCLSPMVLLNTDPLVTSTYHHLGEWIRGEDPTLYETALGTTIWGLFEEKPTYMSLFNEAMASDSQMVDLALKNCTSVFEELDSIVDVGGGTGTTARIICEAFPKLKCVVLDLPHVVANLKGSNNLSFVGGDMFNSIPQADAILLKWVLHDWNDENCIKILQQCRDSIVSKGSIGKVIIIDAVINEKLDDRNMTQTKLSLDIIMLTMNGRERTENEWKQLFIEAGFKHHKIFPLFGFRSLIEVFP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1970 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Aed8g1970 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Aed8g1970 356 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
Aed8g1970 356 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Aed8g1970 356 Gene3D - 1 107 IPR036388 -
Aed8g1970 356 PANTHER O-METHYLTRANSFERASE 4 355 IPR016461 GO:0008168
Aed8g1970 356 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Aed8g1970 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Aed8g1970 356 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 355 - -
Aed8g1970 356 CDD AdoMet_MTases 196 285 - -
Aed8g1970 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 356 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1970 Aed-Chr8 24220203 24221374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1970 18 342 Monolignol Biosynthesis Gene Families AT5G54160 32.733 3.33e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1970 K22588 K13262 gmx:100819853 597.43