Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1969 ATGGGTTCAAATTCAATGAATAACCAAAATGCAATTGAGTTCTTTCATGGCCAAGCTCTTCTGTACACGCAGATATATGGCTGCCTAAAACCTATGTGCCTCAAATGGGTTGTCCAATTAGGTATTCCAGACATAATACACAACCATGGCAAACCCATTACTCTTTCTGAGTTGGTCTCAACTCTTCAAATTCCACCAGCTAAGGCTAATTTTGTGCAGCGGTTCATGCGGTTTTTGGCACACAATGGAATTTTTGATATCCGTGAGAGCCAAGAAGAAGATCATGAATCAACATATGCTCTAACCCCTGCTTCAAAGCTTCTAGTGAGTGGCAGTGACCATTGCTTATCTCCAATGGTTCTGTTCAACACTGATTCAGCTGTGACGAATACATACCATCACTTCGAGAATTGGATTCGTAGGGAGGACACCACATTATATGAGACAGCCGTAGGGACAACCATGTGGGGATATCTTGAGGAAAAACCAAAATATTTGAGTCACTTCAATGAGGCTATGGCTAGTGATTCTCGAATAGTTGACTTGGCACTCAAAAATTGCACTTCTGTTTTTGAGGGGTTAGATTCTATTGTGGATGTGGGTGGTGGAACTGGAACCACAGCCAAAATTATCTGTGAGACATTTCCTAAGTTGAAATGTGTGGTGTTCGATCTTCCTCATGTTGTAGCAAACTTGACAGGAAATGATAATTTAAGTTTTGTTGGAGGTGACATGTTCAACTTTATCCCCCAAGCTGATGCAGTTCTCCTAAAGTGGGTTTTACATAATTGGAATGATGAATACTGCATAATGATCCTGAAAAAGTGTAAAGATTCTATTTCAAACAAAGGCACAGGAGGAAAAGTGGTTATTATCGATGCAGTGATAAATGAGAAGCTAGATGACCCGGATATGATTCAAGCAAAGATTACTTTTGATATAATTATGATGACTATGAATGGAAGAGAGCGAACTGAAAAAGAATGGAAACAACTCTTCATTGAAGCTGGATTCAAACACTACAAAATATTTCCCATATTTGGTTTTAGATCTCTCATTGAGGTCTATCCTTAA 1074 0.3911 MGSNSMNNQNAIEFFHGQALLYTQIYGCLKPMCLKWVVQLGIPDIIHNHGKPITLSELVSTLQIPPAKANFVQRFMRFLAHNGIFDIRESQEEDHESTYALTPASKLLVSGSDHCLSPMVLFNTDSAVTNTYHHFENWIRREDTTLYETAVGTTMWGYLEEKPKYLSHFNEAMASDSRIVDLALKNCTSVFEGLDSIVDVGGGTGTTAKIICETFPKLKCVVFDLPHVVANLTGNDNLSFVGGDMFNFIPQADAVLLKWVLHNWNDEYCIMILKKCKDSISNKGTGGKVVIIDAVINEKLDDPDMIQAKITFDIIMMTMNGRERTEKEWKQLFIEAGFKHYKIFPIFGFRSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1969 357 Gene3D - 3 108 IPR036388 -
Aed8g1969 357 CDD AdoMet_MTases 197 296 - -
Aed8g1969 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 356 IPR029063 -
Aed8g1969 357 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Aed8g1969 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 357 IPR016461 GO:0008168
Aed8g1969 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Aed8g1969 357 Pfam O-methyltransferase domain 132 339 IPR001077 GO:0008171
Aed8g1969 357 Gene3D Vaccinia Virus protein VP39 110 357 IPR029063 -
Aed8g1969 357 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 356 - -
Aed8g1969 357 PANTHER O-METHYLTRANSFERASE 4 356 IPR016461 GO:0008168
Aed8g1969 357 SUPERFAMILY "Winged helix" DNA-binding domain 14 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1969 Aed-Chr8 24214871 24216262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1969 1 343 Monolignol Biosynthesis Gene Families AT5G54160 30.484 4.79e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1969 K22588 K13262 gmx:100819853 577.4