Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1968 ATGGGTTCAATGAATAATAACCAGAAAGAAATTGAGCTCTTTGAGGGGCAAGCTCTTTTGTACATGCAGCTCTATGGCAACCTAAGACCTATGTGTCTTAAGTGGGCTGTCCAACTAGGTATTCCAGACATAATACACAACCATGGCAAACCCATTACTCTTTCTCAGTTGGTCTCAACTCTTCAAATTCCACCTACTAATGCTGCTTTTGTGCAACGATTCATGCGATTTTTGGCACACAATGGAATCTTTGATATCCATGAGAGTCAAAAAGATCATGAATCAGCATATGCTCTAACACCTGCTTCAAAGCTTCTTGTTAATAGCAGTGACCATTGCTTATCTCCCATGGTTCTAGCATTCACTGATCCACTTCGGAATGTTAAATACCATCACTTAGGGGAGTGGATTCGTGGGGAGCAAGCAACAGTGTTTGAGACAGCACACGGAACAAGCTCTTGGGGACTTCTTGAGAAGAACCCTGAATATTTTAGTCTCTTCAATGAGGCTATGGCAAGTGATTCCCGAATTGTTGATTTGGCACTCAAAAATTGCACTTCAGTTTTTGAGGGGCTAGATTCCATGGTGGATGTAGGTGGTGGAACTGGAACCACAGCCAGAATTATTTGTGAGGCATTTCCTAAGTTGAAATGTGTCGTGCTCGACCTTCCTCGTATTTTGAAAAAGTGTAAGGATTCTGTTTCAAACAAAGGCAACGGAGGGAAAGTGATTATTATAGATGCAGTTATAGATGAGAAGCTGGATGACCAGAATATGACTCAAACAAAGCTTAGTTTGGATATAATTATGATGACTATGAATGGAAGAGAGCGAACTGAAAATGAATGGAAACAACTCTTCGTTGAAGCTGGATTCAAACACTACAAAATATTTCCCATATTTGGTTTTAGATCTCTCATTGAGGTCTATCCTTAA 936 0.4028 MGSMNNNQKEIELFEGQALLYMQLYGNLRPMCLKWAVQLGIPDIIHNHGKPITLSQLVSTLQIPPTNAAFVQRFMRFLAHNGIFDIHESQKDHESAYALTPASKLLVNSSDHCLSPMVLAFTDPLRNVKYHHLGEWIRGEQATVFETAHGTSSWGLLEKNPEYFSLFNEAMASDSRIVDLALKNCTSVFEGLDSMVDVGGGTGTTARIICEAFPKLKCVVLDLPRILKKCKDSVSNKGNGGKVIIIDAVIDEKLDDQNMTQTKLSLDIIMMTMNGRERTENEWKQLFVEAGFKHYKIFPIFGFRSLIEVYP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1968 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 310 IPR029063 -
Aed8g1968 311 Gene3D Vaccinia Virus protein VP39 108 224 IPR029063 -
Aed8g1968 311 Gene3D Vaccinia Virus protein VP39 225 311 IPR029063 -
Aed8g1968 311 PANTHER O-METHYLTRANSFERASE 223 310 IPR016461 GO:0008168
Aed8g1968 311 PIRSF O-mtase 1 226 IPR016461 GO:0008168
Aed8g1968 311 PIRSF O-mtase 225 311 IPR016461 GO:0008168
Aed8g1968 311 Gene3D - 1 106 IPR036388 -
Aed8g1968 311 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 223 310 - -
Aed8g1968 311 PANTHER O-METHYLTRANSFERASE 4 226 IPR016461 GO:0008168
Aed8g1968 311 SUPERFAMILY "Winged helix" DNA-binding domain 12 110 IPR036390 -
Aed8g1968 311 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 4 226 - -
Aed8g1968 311 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Aed8g1968 311 Pfam O-methyltransferase domain 130 234 IPR001077 GO:0008171
Aed8g1968 311 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 311 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1968 Aed-Chr8 24186953 24188139 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1968 1 297 Monolignol Biosynthesis Gene Families AT5G54160 26.496 6.32e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1968 K22588 K13262 gmx:100819853 555.829