Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1963 ATGAGTGCGTCGTCTTGTCTGGCTCATGCACCGAATGTGAAATTCCTTACGTGTCAACTTGCATGCAATCAAACGGTAGTGTTTGCAGCATACGGAGCCTTCAATTACGGAGGAGCATATGGGTTAAACATGAACATGAACTACTACATTATGAGTTGTCCTTTTGTTGAACCTGTTGTTAAGAACATTGTCAACGGAGCTTTGCAGGATGATCCAACCTTAGCAGCTGCTCTTATCAGAATGCACTTTCATGATTGCTTCATTCAGGCTGGAGGCCCAGTGTATGACATACCTAAAGGAAGAAAGGATGGAAGAAGATCCAAAATTGAGGATACTATAAATTTGCCATTCCCTACTTTCAATGCTTCTGAGCTCATTAGGTCTTTTGCTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGGGGCTCACACACTAGGAGTGGCAAGGTGTGGTTCATTCAAGAACCGATTGAGCGAAGCGGATCCAACATTGGATGCACAATTTGGCAGCACACTGGCGAGAACATGCAGTGCTGGCGACAACGCAGAGCAGCCATTTGACGCCACGAGTAACGATTTTGACAACGTTTACTTCAACGCTTTGTTGAGGAGAAACGGGGTTCTTACATCGGACCAAACACTCTACACTAGCCCCAGAACCAGGAACTTCGTCAACGCTTATGCCTTCAACCAAGCCATGTTCTTCTTCGATTTCCAACAAGCTATGGTCAAGATGGGCTTGCTTGATGTCAAAGACAGTTCCAACGGTGAAATACGACAAAATTGCCGCAAATTAAACTGA 810 0.4519 MSASSCLAHAPNVKFLTCQLACNQTVVFAAYGAFNYGGAYGLNMNMNYYIMSCPFVEPVVKNIVNGALQDDPTLAAALIRMHFHDCFIQAGGPVYDIPKGRKDGRRSKIEDTINLPFPTFNASELIRSFAQRGFSAQEMVALSGAHTLGVARCGSFKNRLSEADPTLDAQFGSTLARTCSAGDNAEQPFDATSNDFDNVYFNALLRRNGVLTSDQTLYTSPRTRNFVNAYAFNQAMFFFDFQQAMVKMGLLDVKDSSNGEIRQNCRKLN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1963 269 Gene3D Peroxidase, domain 2 116 248 - -
Aed8g1963 269 ProSiteProfiles Plant heme peroxidase family profile. 76 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 ProSitePatterns Peroxidases proximal heme-ligand signature. 138 148 IPR019793 -
Aed8g1963 269 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 Gene3D - 90 269 - -
Aed8g1963 269 PANTHER PEROXIDASE 47 89 267 - -
Aed8g1963 269 Gene3D - 44 89 - -
Aed8g1963 269 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Aed8g1963 269 SUPERFAMILY Heme-dependent peroxidases 44 269 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PANTHER PEROXIDASE 47 41 89 - -
Aed8g1963 269 Pfam Peroxidase 90 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PANTHER PEROXIDASE 25-RELATED 89 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed8g1963 269 PANTHER PEROXIDASE 25-RELATED 41 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1963 Aed-Chr8 24164478 24166692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1963 44 89 Peroxidase AT4G33420 71.739 1.40e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1963 K00430 - gmx:100776019 334.339