Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1958 ATGAGGTTGAGGAGTTTGAACCTTGTGTATGTGAATGAAAAGTTTTACCTATCATACAACACAAGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCCTATTGTTTGGTTGCCATTGGAGGTTCCGAAAACTTCTACAGTGCATTTGAGACTGAGTTAGCAGATGTTATTCCGGTGGTCAAGACCTCCATCAGTGGCACTCGTATTGTTGGTCGTGTTTGTGTTGAACTCAGCACCAGTTGTGATATTATTGTACTGACTTATGGACTTGTGTTACTTGGTCTTTTTACTGTCACTATTACTGAAGAGCTTCAACATTTGAGAAACAGTCTACCCGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGGTTATCCGCTTTGGGAAATTGTATAGCATGTAATGACCATGAAACTGAGGAGATGATCGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACTGTTGCAGGTAATATTCTTGTCGGCGGTTACTGTGTATTCTCCAACAGAGGTGGTTTGGTCCACCCTCATACTTCCATTGAAGACTTGGACGAGCTTTCTACGCTTCTTCAGGTTCCTTTGGTTTCCGGGACCGTCAATCACGGTAGTGAAGTGATAGCTGCTGGCATGACAGTAAATGATTGGACAGCATTTTGTGGCTCAGACACAACGGCAACAGAGCTCTCTGTGATTGAGAGTGTTTTCAAGCTGAGAGAAGCCCAACCTAGTTCCATTGTCGATGAGATGAGGAAATCACTCATTGATACATATGTCTAA 798 0.4211 MRLRSLNLVYVNEKFYLSYNTRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFETELADVIPVVKTSISGTRIVGRVCVELSTSCDIIVLTYGLVLLGLFTVTITEELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHETEEMIADVLGVEVFRQTVAGNILVGGYCVFSNRGGLVHPHTSIEDLDELSTLLQVPLVSGTVNHGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDTYV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1958 265 Pfam eIF-6 family 22 223 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 TIGRFAM eIF-6: putative translation initiation factor eIF-6 22 244 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 Gene3D - 19 245 - -
Aed8g1958 265 SUPERFAMILY Pentein 21 244 - -
Aed8g1958 265 SMART eIF6neu2 21 224 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 CDD IF6 21 243 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 Hamap Translation initiation factor 6 [eif6]. 8 265 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 21 265 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 PIRSF Transl_init_IF-6 19 246 IPR002769 GO:0042256|GO:0043022
Aed8g1958 265 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 21 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1958 Aed-Chr8 24133504 24135947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1958 21 265 Eukaryotic Initiation Factors Gene Family AT3G55620 78.039 1.44e-142 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1958 K03264 - gmx:100777602 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0428 7 3133535 3141850 Aed8g1958 8 24133504 24135947 PCT