Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1942 ATGCCTCTTACTCTAAGAAACAAGCTCAAGACTCTTTGTACTTGTGGTGATGGTTGGTCTTATGCTATTTTCTGGCGCTTTCATCCACGGAATCCCTTGTTGTTGACTGTGGAAGAAGCATACTATGAAGAGCATCTGGGAGAAGAAATTGCCAACATGCATCCACAGGTCCACTTGCTGGGTGAAGGAATTGTAGGTGAAGCTGCTTTCACGGGCAAGCACAGTTGGCTGCACTCAGATGGTCAAACTCATGATTGGAATTTGACTGGGCAAAATATTTGTGAGGATGATTCTGAATTGCAGCAACAGTTCTCCTCTGGGATTAAGACTATTGTGATCGTACCTGTCAAAGCATGGGGAGTGGTACAGTTTGGATCCAGAGAGAAGATCTTAGAGAGAGTGAATTTTTTGGAGCAAACACAAAGCGTTCTCACAGAGATGGATGATGATATGGCTATGTTTGACATGTCGGGAAATGCAGTTTTACCACTGGATTGTGAAGATAATGATTTAAATGAGTTGTTGGCTTCCATTTCTTCTGCAAGTCCCAACAATTCCTTCCCTTCCCAATATAATACTTGTAAAGAAGAAATGGCTTCATTGCAAGGGGATTCTTCTCATCTTGGTGACCAATTGAAAGGTACCATGGAAGCTCTATTTGTATTATCAGATAGGGATAGCGTTGATGTGCTTTTGAAGCCTAACTCTTCTACAAACAACTTAATTGCCGAAAACCCCTATTTTGGTGTATGTGGTAGTGAATTATCTTCTTTTGATTTGTTGGAGCAACAATTGGTATCCTGTGTAAGGGCAAAAGAAGATGATGCAGATGTGTGTTTTTCAAATGAAAATGCATTTGATACCAGCAAACTTCTAGTTCAGGATTCGGCATTGGCCTCAGGGTCGTTTCAAGGAAAATTACAAAATTCACTGGAGAATCAATATTCAACTCAGTCTAGTGTTGTGACAGATGTTGATTTTTCATCAAGTTCAAATGCATTGCATGGACTCTCTGAGAACTTAGAGCCAATTGATATGTCAGAAGAAATTTTGAAATTCAGCTCCATGGAAGATCTTTGCCAGTGGTTTGGTCCTTCTCCCAAGGATAGTAGTATCTGCAAAGCAGTAATTGCATTGGATAGCACCTTTTCTGAATCAACAGAATTTAATCCCACTTCCTTTGATCTGGTTGGAAGTAGTTCTTTAAATGATATTTCAGTGACATACCCAGCTGAGCATAATTCCAACTCAGATGGGAAAGAAACATCTGTGGTCATGCATAGCACCGAAAAGGGTCTCTTAGATAGCATGGAACTTGATTTTTGCTATGATCAAGCTGAAGCATGGTGGGGGAATACGCTTACACCAGTGTCGAGTGGTGTTACTGATACTGGCTTCTCCGAATGCATATCAGAATTTAATACTGATACACTGACCGGCACTCGGAAGAGATTATTCTCAGAGTTAGGCATTGAAGAGCTTTTGAGGGGTGGAGCAAATTACAATCCTTTTAGTAGTTCTGAACTTGAGTATGAGTTATCACCCAATAAGAGGCAGACAGTAGAATCTTCATCAGTGAATAGAAATCCATTACATTTCACCAACCTTCATAGGTCTGGGGCTCGAGCAGGCTTGATGCAACCACTTTGTGACTTAGCCAGCACAAACAACCTTTCAACCAAGAAAGATACATTCCCAAAATTACAAGCAGGCATGTGGATTGATGATAACCATAGCATTAACATTGGGAAGGCTGTTCCAGTACACCCTCAAAAGGCAGAGGAACCTGCAAAGCCACACAAGAAGAGGGCTAGGCCAGGGGAGAGTACTCGACCACGGCCAAAAGATCGTCAGCAGATCCAAGACTGTATTAAAGAGTTGAGAGGAGTCATCCCTAATTGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGCACCATCAGATACATGCTTTTCTTACAAAGTGTCCTCAAGTATTCAGACGAGCTGCAGGAACCAAATGATCCAAAGCTTATTGAACAGGAAAATGAAGTGGTTCTAAAAGACAGCGGTGCGGCGGATAGCAAAAACTGTGGCATTACATGGGCATATGAAGTGGCACACCAAACAATGCTATGCCCAATTATAGTTGAGGACATGAGTCTACCTGGCCAAATGCTTATAGAGATGCTTTGTGCGGAGCAAGGTTTCTTCCTTGAGATAATTGACATTATTCGGGGTTTCGGGCTGAATATCTTGAAAGCCAAGATGGAAAGAAGGAAGAACAAACTATGGGCACGCTTTATTGTTGAGGCAAACAGACATGTGACAAGGATAGATGTATTTTGGTCGCTAATCCATCTTCTACAGCAAACAAACACTCCTGGCATTGATTCTTCAAATAAGCATAGCGATGCTATTGAAGCCAATGTTTAG 2415 0.4153 MPLTLRNKLKTLCTCGDGWSYAIFWRFHPRNPLLLTVEEAYYEEHLGEEIANMHPQVHLLGEGIVGEAAFTGKHSWLHSDGQTHDWNLTGQNICEDDSELQQQFSSGIKTIVIVPVKAWGVVQFGSREKILERVNFLEQTQSVLTEMDDDMAMFDMSGNAVLPLDCEDNDLNELLASISSASPNNSFPSQYNTCKEEMASLQGDSSHLGDQLKGTMEALFVLSDRDSVDVLLKPNSSTNNLIAENPYFGVCGSELSSFDLLEQQLVSCVRAKEDDADVCFSNENAFDTSKLLVQDSALASGSFQGKLQNSLENQYSTQSSVVTDVDFSSSSNALHGLSENLEPIDMSEEILKFSSMEDLCQWFGPSPKDSSICKAVIALDSTFSESTEFNPTSFDLVGSSSLNDISVTYPAEHNSNSDGKETSVVMHSTEKGLLDSMELDFCYDQAEAWWGNTLTPVSSGVTDTGFSECISEFNTDTLTGTRKRLFSELGIEELLRGGANYNPFSSSELEYELSPNKRQTVESSSVNRNPLHFTNLHRSGARAGLMQPLCDLASTNNLSTKKDTFPKLQAGMWIDDNHSINIGKAVPVHPQKAEEPAKPHKKRARPGESTRPRPKDRQQIQDCIKELRGVIPNCGKCSIDSLLDRTIRYMLFLQSVLKYSDELQEPNDPKLIEQENEVVLKDSGAADSKNCGITWAYEVAHQTMLCPIIVEDMSLPGQMLIEMLCAEQGFFLEIIDIIRGFGLNILKAKMERRKNKLWARFIVEANRHVTRIDVFWSLIHLLQQTNTPGIDSSNKHSDAIEANV 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1942 804 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 617 660 IPR036638 GO:0046983
Aed8g1942 804 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 3 803 IPR043561 GO:0003700|GO:0006355
Aed8g1942 804 MobiDBLite consensus disorder prediction 591 619 - -
Aed8g1942 804 MobiDBLite consensus disorder prediction 588 619 - -
Aed8g1942 804 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 604 653 IPR011598 GO:0046983
Aed8g1942 804 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 143 IPR025610 -
Aed8g1942 804 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 3 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1942 Aed-Chr8 23986957 23991061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1942 569 804 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 46.414 2.21e-60 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1942 - - gmx:100798158 1350.11