Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1938 AACCAAGATGGCCAATCATTCAAGTCACAACAGAATGCTGCTATCTCTCTTGCTTGTGTTGTTCCAAATCCAAGCCAAGGTGCTTTGCTACCAACACAAAGTTGGAGATCTAGATGCTTGGGGGATACCCACATCAACAAATCCACAATGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTCACAGAGGAATCCTACAAGAGGTGCAACATTAAAGACCCGATATTGTACATGAACAATGGGAACTCTTTGTTTAACATTACATCAAAGGGCCAATTCTACTTCACTAGTGGCGAGCCTGGCCATTGCCAAAAAAATCAAAAGCTTCATATAGCTGTGGGTGAAGGAATAATAGAAACGATGGATACAACACCTGGTCCAAGTTCATCATTGCCTGCAAATGCAGCCTCCTATCCCCCATTTACCCTTCCTTTAAGTTTGGAACAATGGCTTACCTCTATATAA 471 0.4183 NQDGQSFKSQQNAAISLACVVPNPSQGALLPTQSWRSRCLGDTHINKSTMFLYPPSQDSVIQVTEESYKRCNIKDPILYMNNGNSLFNITSKGQFYFTSGEPGHCQKNQKLHIAVGEGIIETMDTTPGPSSSLPANAASYPPFTLPLSLEQWLTSI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1938 156 PANTHER BLUE COPPER PROTEIN 48 127 IPR039391 GO:0009055
Aed8g1938 156 Gene3D - 30 115 IPR008972 -
Aed8g1938 156 Pfam Plastocyanin-like domain 49 108 IPR003245 GO:0009055
Aed8g1938 156 ProSiteProfiles Phytocyanin domain profile. 1 117 IPR003245 GO:0009055
Aed8g1938 156 PANTHER MAVICYANIN 48 127 - -
Aed8g1938 156 SUPERFAMILY Cupredoxins 44 115 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1938 Aed-Chr8 23972665 23973814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1938 45 135 Phytocyanin Superfamily AT1G64640 54.945 2.67e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1938 - - gmx:100527517 186.808