Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1937 ATGGGGAGCGGTAGCAGAAGCTACTCGGCGAACCCGAGCGATTACAAGCTTCTAGAAGAAGTCGGGTACGGCGCGAGCGCCACCGTGTACCGCGCAATCTACCTCCCCTACAACGAGGAGGTGGCGGTGAAGTCCCTGGATCTGGATCGCTGCAACAGCAATCTCGATGACATACGGAGAGAAGCCCAGACCATGAGCCTCATCGAGCACCCCAACGTGGTCCGGGCCTTCTCCTCCTTCGTCGTGGACCGCAGTCTCTGGGTCGTCATGGGCTTCATGGCCCAGGGCTCCTGCCTCCACCTCATGAAGGCCGCCTATCCCGAAGGTTTCGAAGAGGCCGCCATCGGATCTATCCTCAAGGAGACTCTCAAGGCCCTCGACTACCTCCACCGACACGGTCACATTCACCGCGACGTCAAGGCCGGGAATATTCTCCTCGACAACAACGGCCAGGTCAAGCTCGCCGACTTCGGCGTCTCCGCTTGCATGTTTGACACCGGCGACCGCCAGCGCTCCAGAAACACCTTTGTCGGAACTCCCTGCTGGATGGCGCCGGAGGTGCTGCAACCGGGGACCGGTTACAATTTCAAGGCGGATATTTGGTCGTTTGGAATTACCGCGCTGGAGTTGGCTCATGGTCACGCGCCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTAATGACCATTCAGAATGCTCCTCCAGGGCTTGATTATGATCGTGATAGAAAGTTCTCCAAGGTATGGGTGTTCTTTCTGCCTAGACGTTGTGACCAGTCTTTTAAGGAAATGGTTGCAATGTGCCTGGTAAAAGATCAAGCTAAGAGGCCAACTGTGGAGAAGTTGCTCAAACACTCATTCTTCAAACAAGCTAAGCCTCCAGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCGCCTCTGTGGAACCGTGTAAAATCCCTCCAGATTAAAGATGCAGCTCAGTTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCTATATCTCAAAGTGAATATCACCGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAAGCGGCATTGATGCAGGACGATGATGATATTGCAGATATGAGGGAAGAAGATGAAAACAAATACTTCAGCTCTTACAAGGGTACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATCAGTTCACTTCACAAGTAGGTAGTAATGACATACCACAGAGTGAGAAAAGAAATGGATCAGTTGCTGAAGCAACACCATCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAATCTCAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGACGCCAGGCTTAGTGCTTGGTCATTCTTTATCTGAAAGAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCCGTTATCCGGTGAGAAAAGTAATCGTGATATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAATCGAGCTTCAGCAAATAGTTTATCAGCTCCAATCAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAAGGTGCAAATTAAAGGACGATTTTCAGTGACACAAGAAAATTTCGATCTGGTGAAGCCAATTGGTCAGTCCTCCAATGATTCTGCCAATATCAATCTTCCTGCATCACTTCTAGTGCCTCATCTTCACAATCTTTTCCAGCAGACATCTATTCAACAGGAACTTATAGTGAATATGTTGAATAGCTTGCAAACTGCTGAGGCAATTGATGCTTCTCAGAATGGAAAATTACCACCATTACCTCGCAATTCAGAGAACAATGGAAGTGTTGATACAGCAGTTTCAGAGAAGGAACAGCAGCTGCTGGCCACAATTTCCGAACTCCAATCCCGGATGATTAATTTGACCGATGAACTGACTTATGAGAAGTTAAGATACATGCAGTTGCAACAACAGCTATCTGGTATCTACAGCCAGGAACAAAATGGGGAAAGAGACGAATTTGCATGA 2043 0.4684 MGSGSRSYSANPSDYKLLEEVGYGASATVYRAIYLPYNEEVAVKSLDLDRCNSNLDDIRREAQTMSLIEHPNVVRAFSSFVVDRSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALDYLHRHGHIHRDVKAGNILLDNNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKVWVFFLPRRCDQSFKEMVAMCLVKDQAKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKSLQIKDAAQLALKKMPSAEQEAISQSEYHRGVSAWNFDIDDLKAQAALMQDDDDIADMREEDENKYFSSYKGTTDSQFIVDKKNSNNLQQDQFTSQVGSNDIPQSEKRNGSVAEATPSTLENDVGTSKVKSQSVKLGKTQSGPLTPGLVLGHSLSERGRAFERFENENPLSGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKVQIKGRFSVTQENFDLVKPIGQSSNDSANINLPASLLVPHLHNLFQQTSIQQELIVNMLNSLQTAEAIDASQNGKLPPLPRNSENNGSVDTAVSEKEQQLLATISELQSRMINLTDELTYEKLRYMQLQQQLSGIYSQEQNGERDEFA 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1937 680 MobiDBLite consensus disorder prediction 405 453 - -
Aed8g1937 680 CDD STKc_OSR1_SPAK 13 288 - -
Aed8g1937 680 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 673 - -
Aed8g1937 680 Gene3D Transferase(Phosphotransferase) domain 1 96 339 - -
Aed8g1937 680 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 673 - -
Aed8g1937 680 SUPERFAMILY Protein kinase-like (PK-like) 13 341 IPR011009 -
Aed8g1937 680 MobiDBLite consensus disorder prediction 405 462 - -
Aed8g1937 680 Pfam Protein kinase domain 15 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1937 680 MobiDBLite consensus disorder prediction 603 623 - -
Aed8g1937 680 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Aed8g1937 680 Coils Coil 629 649 - -
Aed8g1937 680 ProSiteProfiles Protein kinase domain profile. 15 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1937 680 Gene3D Phosphorylase Kinase; domain 1 4 91 - -
Aed8g1937 680 SMART serkin_6 15 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1937 Aed-Chr8 23953080 23962357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1937 8 672 MAP Kinase Kinase Kinase Kinase AT4G10730 62.571 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aed8g1937 Pkinase 3.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1937 - - gmx:100783699 1189.87