Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1932 ATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCCGACCCGCCGGACGAGTGGGTGGACGGGTCATGGACGGTGGACTGCATCTGTGGCGTCACCTTCGACGACGGCGAAGAGATGGTCAAATGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCGCGCTACGTGAAGGGCGACGACACCTTCGCATGCGACAAGTGCAAGGCCAAGCACCACAACAGCAACAACAACAGCAGCAACAACAGCGGCACCAACCCCGAGGAGACCGAGGTGGCGCAGTTTCTGGTGGAGCTCCCCACAAAAACCATCTCAATGGACAACAAAAAGGCCCTCCCCTCCAGGCCCAGGCTCTGGACCGATAGGCCCATGGAGGAGCGGGTCCACGTCCAGGGCCCACCCGCCGGCGACCCTTCCATCTACGCCGGCAAGAGCACCTCCTCGATTTTCTCGCCCCAGCTCTGGAAGGCCTGCGGGTATGTCCCCAAGAGGTTCAATTTTCCGTACAAGGAGTTCCCTTTCTGGGGCGATAACGATAAAGATAGCGAGGCTGCGCCATCACAAGCACAGGGTAATAATAATAATCCCGATAATGGGGCTGGGTCTCTTTTTTCTCTATCTAAAGAGACTAATTCTGTTGGTGCTCCGGTTGAAACGAGATCTGGTCACGGCAAGGACGCGGTGGATGTGCCGCCACGTGTTCACAGTGACGTCGTCAAGAAGGAGAGGTCTCTGCTGAGGCCTCCAGCTGTTCATAACAGTAAACGCAGCAAAGGGGATTTCGGGAATTCGAGTTCCAGGGACAGGACTGTGAAGAAGCGCGTTAGGACTTCCGAAAGAGAAGCAGATCCCAGGAAGAAAACGCTGTATTCCTCTAAACCAGTGTTGCCCACCACTGATGGAAAGCAATTGGACTTTTATGAGGACAGAGGATTGAAGATTTCCAAGGCTCATGCTCGGAGCATAAAGAATAGAAACTCAAAAGACACGGTGGTTCAAGAACATGTTTCTGATGATCATGTAGCTGTGGATACTATCATGGAGGAGCCAAATAACAACTTAACCATTACTGAGGACTCTTCAGAACCATTGTATCCTGACATGACTAGACATGGTGTTTCTGTTGGAGACGTAGTAGCAGAAGAGAAGGCTAGCTATAAAGCTCCTTCTTTGGTTGAGATGTCTGCTAAGACTGATGATGCTGTTACATCAGCCTTAAAGCAGAATTATGTTGGAAATGCTTCAGTTAAAGAAAAGGATGGAGATTGCTTGGTAGCTGATAATGCAGATGGCACTTTAGTAGTAAGAAGTGCTGCAAGTCCTCACACAGAAGGTCATTTTGGTTCTGCGCCAGAACTTGTGGATAACCAAGTTTCACAAGAGCTTGACTGCAACATGTGTCCTAGCTCTTCAAAGTGCAATGCTAAGATGAAGAGAGAAGATGATGTTGATAATTTTAAGAAGCCCTCAAATTTTCATTCTTCTCCTATCAGTGATATTAAAAACAATGAAAATCCATCTGATATTGTTAAAGTGAATAATGCTCCAGTTCCCAGTTTACCATCACGTGAAAGTAAGGTGGGTGGTGTTGACATTTCAGCAGAACTAATCCCTGCTGATCATACCAATAAACCCAATGAATTACCTGGTGATTTTTGTCATAGAAAACAGGAACTGGAGGGGTCTGAAGGTTCATTGGAAACACACAAGGGATTTTCAGAAACAAAAGACAGTTCAGATGCTGCTAAAGATCCATCAAAATCTGAAGCACTTGGATGTCTGCCTAAAGTTGGGAAGTCATCTCCAACTTCATCAACCATGATCATCTCTAAATCATTGGGTCATGACATCAAATCTGAAGATACCGAAATCCCTAATTCTTTGATGAAGCATGGAGTAATGGCTGATAGTAACATTCACATACAGAATGAAAATTGTCCAAGTAATGCTGCCAAGGATGAAAATCCAAAAAAGTCTGTAAAAGAGCGACCAAAATCCTCTTTGAATTCCAATTCAAAAGGATTGCATTCAAGCAGGAGTGTGCAAAATTCTATCTCAAAGCAAATGAATTCAGATGCGAGAGATTCTGTTCATGTTTCGTCATCTAAACCTTTGATACATCAGGCTGCAAGTATTTTAGGCTCTGGTGAGTCTAATGCATCATTGCACCATCAGAAGGGTTTACAAGTGCAGAATAAGATTTCATCCTCAGCGCCACAGAAAGTTGATAAACTTAGCCAACCAAACATCCACAGTTCCTCCAAGTTGAACCAAAGTCATGTACCATCAGTGAATCCTTCTCCAATATCGAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTCTGCTATTGCATCAGGAACTGAATAGTTCTCCTCGTGTACCTCGTGTACCCCGAGCACGCCATGCAGGTAGCTTGCCCCAGTTGACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACATCGGGTGGAGGAAAGGATCATTATCTGGTATCTAGACGAAAACACAAGGACACATCTAGAGATGGGTCTGGCAGTTCTCGTGAACTTGAAGATGAAGCTAAAAGGATAGAGAAGGAGAAGGGTCCATCCCTGTCTGATCAGAGTAAACAAGACATGTCATATGTGGAAGATGCTTCTACAAGGGAAGAAGGCCTTGCATCTATGGCAGCAGCAAACTCCATCACAAACAATACCATTTCTTCCAACTCTGCAGTTGCAAACAGCAATGCATCCTCCCCTCCTGAGGATCAGAATTTGTCATCTATGCGTAACTCACCTAGGAATGTATCTGATGATGATACAGCAACAGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGATATTATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCAACCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGTTATGCATACTCAAGTCACTCTCAGGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGAAACCTTTCAATCTAAAACACGGGTCAATGTTTCAGACAAATTCTAATAGGAAAAGGCGTAAGCTAGATGCTGAAGAGTCTGATGATAACGGATATGGCAAGGGAAGAAGTGCAAAAGATGTTCAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGAAGTCAGGAGGAGACAGAAAGCTGACTCGCTAACAGATGAGGATCTCGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGAAGATGAAATTCAGGTTGGCAGAGTATCTCCACCAGGAAGTACATCAGATGAGGCAGGTAGTGCCTAA 3420 0.4605 MKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKAKHHNSNNNSSNNSGTNPEETEVAQFLVELPTKTISMDNKKALPSRPRLWTDRPMEERVHVQGPPAGDPSIYAGKSTSSIFSPQLWKACGYVPKRFNFPYKEFPFWGDNDKDSEAAPSQAQGNNNNPDNGAGSLFSLSKETNSVGAPVETRSGHGKDAVDVPPRVHSDVVKKERSLLRPPAVHNSKRSKGDFGNSSSRDRTVKKRVRTSEREADPRKKTLYSSKPVLPTTDGKQLDFYEDRGLKISKAHARSIKNRNSKDTVVQEHVSDDHVAVDTIMEEPNNNLTITEDSSEPLYPDMTRHGVSVGDVVAEEKASYKAPSLVEMSAKTDDAVTSALKQNYVGNASVKEKDGDCLVADNADGTLVVRSAASPHTEGHFGSAPELVDNQVSQELDCNMCPSSSKCNAKMKREDDVDNFKKPSNFHSSPISDIKNNENPSDIVKVNNAPVPSLPSRESKVGGVDISAELIPADHTNKPNELPGDFCHRKQELEGSEGSLETHKGFSETKDSSDAAKDPSKSEALGCLPKVGKSSPTSSTMIISKSLGHDIKSEDTEIPNSLMKHGVMADSNIHIQNENCPSNAAKDENPKKSVKERPKSSLNSNSKGLHSSRSVQNSISKQMNSDARDSVHVSSSKPLIHQAASILGSGESNASLHHQKGLQVQNKISSSAPQKVDKLSQPNIHSSSKLNQSHVPSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYLVSRRKHKDTSRDGSGSSRELEDEAKRIEKEKGPSLSDQSKQDMSYVEDASTREEGLASMAAANSITNNTISSNSAVANSNASSPPEDQNLSSMRNSPRNVSDDDTATAGRPVHRTLPGLINDIMSKGRRMTYEELCNAVQPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKKPFNLKHGSMFQTNSNRKRRKLDAEESDDNGYGKGRSAKDVQGKNFELQKEEFPKGKRKARKRRRLALQGRAVKEVRRRQKADSLTDEDLGPFSNSSEESMFSEEDEIQVGRVSPPGSTSDEAGSA 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1932 1139 MobiDBLite consensus disorder prediction 905 934 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 827 867 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 905 944 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 183 217 - -
Aed8g1932 1139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 77 IPR013083 -
Aed8g1932 1139 SMART PHD_3 26 69 IPR001965 -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 547 584 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 489 505 - -
Aed8g1932 1139 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1135 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 638 652 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 598 612 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 1082 1099 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 1012 1139 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 222 249 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 806 820 - -
Aed8g1932 1139 PANTHER UNCHARACTERIZED 1 1135 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 539 701 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 722 772 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 486 505 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 665 701 - -
Aed8g1932 1139 SUPERFAMILY FYVE/PHD zinc finger 15 73 IPR011011 -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 178 302 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 792 883 - -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 261 288 - -
Aed8g1932 1139 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Aed8g1932 1139 MobiDBLite consensus disorder prediction 1029 1068 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1932 25 68 PHD Transcription Factor Family AT5G22260 44.681 2.54e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1932 - - gmx:100810855 1809.65