Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1924 ATGATGGGGACCGAGCTCATGAGAATATGTGTTAAAGAAGATAATGATGATTTTCCATCAGTTCCACCAGGGTTTGAGTCATATACATCTTTCTCACTAAAGAGGGTAGAAAACAATGAAAAACAAGATGATAAAAACATGACTAGTTGTTCAGCCTCTACAAGTGCTTCTGAATCAGCATCAACTCAGGTGGAAAATGATGTTCAAGTTCATGATACTGCAAAGATTCCTAGATCCCTTCGACGAAGACCATGGATTAATTATGGACAATATGAGAACATTTCAGATGAAGACCCTGACTGTGAGCGGCTTGATCAAAATTTCTCTTGTCTTCCCCGGGGAGTCATCCGTGGATGTCCAGACTGCAGTAATTGCCAAAAGGTTGTTGCCAGATGGCAACCAGAAGATGCTCGTAGGCCAAATCTTGAGGATGCTCCTGTTTTCTACCCTACTGAAGAGGAGTTTCAAGATACTTTGAAATATATATCAAGCATTCGCTCCAGGGCTGAGCCATATGGAATTTGTCGCATTGTTCCACCATCTTCTTGGAAACCCCCTTGTCCTCTCAAGGAAAAAAATACATGGGAGGGTTCTAAATTTTCTACACGTGTTCAGAGGATTGACAAACTTCAGAATCGTTATTCAATGAGAAAGATGTCAAAGATTCAAACTAATAAGAGGAAAAAGAGAAGATGCACAAGAATGGGGGTGGATAATAGCACTAGAACAGGACCTAATGCAGGATTTTGTGAAGCTGAAAGGTTTGGGTTTGAACCTGGGCCAGAATTTACCTTGGAAACATTTCAGAGATATGCAGAAGATTTTCAGCTCAAATACTTCAGAAAAAACGAGAATGCATCTCATTTGGGTGCTAATATGACAATTTTAAATGCTACCTCAGTGCCTTCAGTAGAGAATATTGAAGGTGAATATTGGCGGATGGTCGAGAGTCCCACAGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACTGGGATTTTTGGGAGTGGTTTCCCTAGCAAATCTACTCAAGTAGGTTCTGCTTCACATGAACAGTACATAAGATCTGGCTGGAATTTAAATAACTTTGCAAGGCTACCTGGATCTCTGCTCTCTTATGAAAGCAGTGATATATCTGGTGTTCTAGTGCCATGGTTGTACATAGGAATGTGCTTTTCCTCCTTTTGTTGGCATGTGGAAGATCACCATTTATATTCATTGAATTACATGCACTGGGGAGCTCCAAAAATGTGGTATGGTGTCCCTGGAAAAGATGCCTGCAAATTGGAAGAGACCATGAGAAAGCATTTACCAGAACTTTTTGAAGAACAGCCTGACTTGCTTCATAAGCTGGTCACCCAGCTTTCTCCTTCTATCCTGAAGTCTAAAGGAGTACCAGTTTATAGGTGTGTCCAAAACCCTGGCGACTTTGTTCTGACATTTCCTCGAGCCTACCACGCTGGGTTCAATTGCGGCTTCAACTGTGCTGAGGCTGTTAATGTAGCTCCTGTTGACTGGTTGCCCCATGGGCATATTGCTATAAAGCTGTACCAGGAGCAGGGGCGCAGGACTTCTATATCACATGACAAGCTGTTGCTTGGGGCTGCAAGGGAAGCAGTACGAGCCCTATGGGAGCTTGATTTGCTGAAGAAGAATACTTTGGATAATCTGCGATGGAAGGATGTCTGTGGAAAGGACGGCCTTTTGGCAAAAGCACTCAAGATGCGCGTTGAGATGGAGCGAGCAAGAAGGGAATTTCTCTGCAGTCCTTCACAGGCATTAAAAATGGAGAGTACTTTTGATGCTACAAATGAAAGGGAATGCAGCAATTGCTTTTTTGATTTACACCTATCTGCAGCTGGTTGTCGCTGTTCCCCGGATAGATATGCTTGCTTGGATCATGCAAAGCAGTTTTGTTTATGCTCTCAGGATTCCAAATTTTTCCTCTTTCGGTATGATATCAGCGAACTGAGTATTCTTGTGGATGCATTGGAAGGAAAATTAAGTGCAATATACAGATGGGCAAAAACAGATCTTGGGCTGGCATTATCTTCTTATGTCTTAGCAGGCAGGGAAACAATACGTAAGGAATTGAAATCACATTCATGTAATTTGGCTCATTCTTCCAGGGCCACTGTGCATAAAGAGATGGCTTTGCATCCATCAAATAAATATATTGATGATTCTCAATTGATTGATGTCCCTATAGAGAATCAAGCAAATAGCAAAGATCAGAGCTATTTTCAACAGAGGAAATTGCTTGAAGCTATTTCATCTTCAAGTTCCATGAAGGAATTCCTAACATTGAAAAGCTCAAAACCTACATCTGAGATGGCTAATCATAAGATCGGTGTTAATAAAGAAGAATCGGTTATTTGCAGATCAAATATGAGAACCCCTAGTTGTCAATTGTCTCAAGAGGATACATCATATGCTTTATCTGTGCCTGTAGCTCAACATGGAGGTGAAAAAAGTTCACTTTACACACATAATAACAGTATTATACTTCTTAGTGACGATGAAGATGATGAAAAGAAGATGTCTGATTCAAATAGAAGGAAGGAACTTTCGATGCTTGCAGGTCCTAAAGATAAGGCAATCCCATGTAATGATATAGAAAATACAAAGTTGACCATTTCTGTGACAGATTCTGCTGTGATAGGTGAAAAGGATGCTATTACACTGCCCCGTGAAAATATAAGTTCTGATTCAACTCGGCTTTTGAATGTGAAACAAGAATGTCATGAACTCACAGGAACAGTTCTAGCCTCTACCCCAGTAGATCTTTCTTGTCATATGGGTCTTACAAGTACAGAATCTACTAGAAATGTTCCAGCTCCTTCAAAAGTAGAGGCCAGTGATCATTGTTTGGAAAGTTTGGAGGTTTGTCCTCCAAACCGACAACTTTCTGGCATTAAGGTTAAGACTGAAGATAATCATGAAAGGCTTGGAGTATGTGCCACTTCTAACGTAGCAGACAATGCAAGAGCTGTTAATGGGAACTTTTCTTGTGGTCCAAACAATTACCGTCAGAAAGGTCCTCGGATTGCAAAGGTTGTCCGACGCATCAACTGCAATGTTGAACCATTAGAATTTGGAGTTGTGCTCTCTGGAAAGTCTTGGTGCAGTAGTCAGGCAATATTTCCAAAGGAAATACTTGATGCTGGACGTGGTTGGCCTCTATTTATGGCTATTGAGGCGCTGGATCGAAATCGATTATGTAATGAATATTGGGACTCACGGCCTTACTCTCGTCCTCAGGGACAGATTTCACAATCGTGCCAAACCAGTGTCAATGGTGGAAATGATCAAGGGGGTCTCTTGAATAAGAACATGCCCGATGAAGATGTTGCAGTACTAACTAGCCTATTTAAAAAGGCTAATGCAGAAGAGTTGAACTTATTGTACAACATTCTTAGTGACAAAAGGTCAGAGGCTGACAGGAACCTAATTGCGCAACTTCTCAATGAAGAGATTCACAAATCACAACCGCCCTAG 3501 0.4127 MMGTELMRICVKEDNDDFPSVPPGFESYTSFSLKRVENNEKQDDKNMTSCSASTSASESASTQVENDVQVHDTAKIPRSLRRRPWINYGQYENISDEDPDCERLDQNFSCLPRGVIRGCPDCSNCQKVVARWQPEDARRPNLEDAPVFYPTEEEFQDTLKYISSIRSRAEPYGICRIVPPSSWKPPCPLKEKNTWEGSKFSTRVQRIDKLQNRYSMRKMSKIQTNKRKKRRCTRMGVDNSTRTGPNAGFCEAERFGFEPGPEFTLETFQRYAEDFQLKYFRKNENASHLGANMTILNATSVPSVENIEGEYWRMVESPTEEIEVLYGADLETGIFGSGFPSKSTQVGSASHEQYIRSGWNLNNFARLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEETMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPVYRCVQNPGDFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLPHGHIAIKLYQEQGRRTSISHDKLLLGAAREAVRALWELDLLKKNTLDNLRWKDVCGKDGLLAKALKMRVEMERARREFLCSPSQALKMESTFDATNERECSNCFFDLHLSAAGCRCSPDRYACLDHAKQFCLCSQDSKFFLFRYDISELSILVDALEGKLSAIYRWAKTDLGLALSSYVLAGRETIRKELKSHSCNLAHSSRATVHKEMALHPSNKYIDDSQLIDVPIENQANSKDQSYFQQRKLLEAISSSSSMKEFLTLKSSKPTSEMANHKIGVNKEESVICRSNMRTPSCQLSQEDTSYALSVPVAQHGGEKSSLYTHNNSIILLSDDEDDEKKMSDSNRRKELSMLAGPKDKAIPCNDIENTKLTISVTDSAVIGEKDAITLPRENISSDSTRLLNVKQECHELTGTVLASTPVDLSCHMGLTSTESTRNVPAPSKVEASDHCLESLEVCPPNRQLSGIKVKTEDNHERLGVCATSNVADNARAVNGNFSCGPNNYRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSSQAIFPKEILDAGRGWPLFMAIEALDRNRLCNEYWDSRPYSRPQGQISQSCQTSVNGGNDQGGLLNKNMPDEDVAVLTSLFKKANAEELNLLYNILSDKRSEADRNLIAQLLNEEIHKSQPP 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1924 1166 MobiDBLite consensus disorder prediction 37 71 - -
Aed8g1924 1166 MobiDBLite consensus disorder prediction 45 69 - -
Aed8g1924 1166 PANTHER LYSINE-SPECIFIC DEMETHYLASE 956 1042 - -
Aed8g1924 1166 PANTHER LYSINE-SPECIFIC DEMETHYLASE 73 726 - -
Aed8g1924 1166 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1065 1163 - -
Aed8g1924 1166 MobiDBLite consensus disorder prediction 220 240 - -
Aed8g1924 1166 Pfam jmjN domain 146 179 IPR003349 -
Aed8g1924 1166 Pfam C5HC2 zinc finger 609 659 IPR004198 -
Aed8g1924 1166 Pfam JmjC domain, hydroxylase 386 502 IPR003347 -
Aed8g1924 1166 ProSiteProfiles JmjC domain profile. 356 519 IPR003347 -
Aed8g1924 1166 Coils Coil 566 586 - -
Aed8g1924 1166 MobiDBLite consensus disorder prediction 841 861 - -
Aed8g1924 1166 PANTHER JUMONJI 14-RELATED 956 1042 - -
Aed8g1924 1166 PANTHER JUMONJI 14-RELATED 73 726 - -
Aed8g1924 1166 PANTHER JUMONJI 14-RELATED 1065 1163 - -
Aed8g1924 1166 SMART JmjN_1 144 185 IPR003349 -
Aed8g1924 1166 ProSiteProfiles JmjN domain profile. 145 186 IPR003349 -
Aed8g1924 1166 Gene3D Cupin 130 503 - -
Aed8g1924 1166 SUPERFAMILY Clavaminate synthase-like 354 546 - -
Aed8g1924 1166 SMART cupin_9 356 519 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1924 Aed-Chr8 23804631 23815280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1924 1062 1161 JUMONJI Transcription Factor Family AT1G08620 41.121 7.70e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed8g1924 JmjC 4.7e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1924 - - gmx:100809262 1950.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1924 8 23804631 23815280 Aed8g1924 8 23804631 23815280 ECH