Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1914 ATGGTGGGAGTGGTGATAGAAGACGAAGAAGACGAAGTAGTGGTTACTGCTCCAAAGAACTTTTCAATGGTTGATGAGGAAATTTATCGCTCCAGTTTCCCTCGATCTTCTAATTTCTCCTTTATTGAAACTCTCAATCTTCGATCCATCATATACTTGTGCCCCGAAACCTATCCGCAAGAAAATTTAGAGTTTCTTGAATCGCAGAATATTCGGCTCTTTCACTTTGGTATTGAAGGCAAGACGGATCTCTCTGTGTCTGCCGTTAGGGATAATATCTTGGAGGCTGTCAAAGTTTTAATTGATGTGAGAAATCACCCGGTTTTAATCCACTGCAACCAAGGAAAGCACCGAACTGGTTGCGTTGTTGGTTGCTTGAGAAAATTGCAGAGTTGGTGTTTATCTTCTGTGTTTGAGGAGTACAAGCAATTTGCTGGTGCTAAATCCAGGACAACAGATTTAAGGTTCATAGAAACAGTTGACTTGTTAAGCCTGAGACAGTGTCTCAACAGCATCATATATCAGTACCTAGGATATGCTTCAAAGAATCGGCGGTTGCTGTATAGAGATGAGAATTCACTCAAGCCCCAGTTAACATCAGTTTAG 606 0.4125 MVGVVIEDEEDEVVVTAPKNFSMVDEEIYRSSFPRSSNFSFIETLNLRSIIYLCPETYPQENLEFLESQNIRLFHFGIEGKTDLSVSAVRDNILEAVKVLIDVRNHPVLIHCNQGKHRTGCVVGCLRKLQSWCLSSVFEEYKQFAGAKSRTTDLRFIETVDLLSLRQCLNSIIYQYLGYASKNRRLLYRDENSLKPQLTSV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1914 201 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 10 184 - -
Aed8g1914 201 ProSitePatterns Tyrosine specific protein phosphatases active site. 110 120 IPR016130 GO:0016311|GO:0016791
Aed8g1914 201 PRINTS Plant and fungal dual specificity phosphatase signature 88 102 IPR020428 GO:0016791
Aed8g1914 201 PRINTS Plant and fungal dual specificity phosphatase signature 52 65 IPR020428 GO:0016791
Aed8g1914 201 PRINTS Plant and fungal dual specificity phosphatase signature 71 85 IPR020428 GO:0016791
Aed8g1914 201 PRINTS Plant and fungal dual specificity phosphatase signature 15 32 IPR020428 GO:0016791
Aed8g1914 201 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 184 - -
Aed8g1914 201 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 91 123 IPR000387 GO:0016311|GO:0016791
Aed8g1914 201 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 160 IPR029021 -
Aed8g1914 201 Gene3D Protein tyrosine phosphatase superfamily 15 164 IPR029021 -
Aed8g1914 201 ProSiteProfiles Dual specificity protein phosphatase domain profile. 20 169 IPR020422 GO:0006470|GO:0008138
Aed8g1914 201 Pfam Tyrosine phosphatase family 17 161 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1914 Aed-Chr8 23721788 23723256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1914 1 201 Protein tyrosine phosphatase (PTP) family AT3G02800 62.069 1.00e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1914 K18045 - gmx:100808199 348.591