Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1888 ATGGCTTCTCTCTCTTGCTCAGCCAACGACCTCTTCAACGACACCGCCGCCGCCAACTACCTCTGCGCCCAATTCGATTCCATTTCCAAGAAGCTCGCCGACACAACCTACGCGGTGGACAACACCTATCTTCTCTTCTCAGCGTATCTAGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGAGGCCTCTCCTACTACCTCTTCGGCTTCGCTTTCGCCTTCGGCTCCCCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGACTCAGGGATTACCCTGTTCCCGCCGGCGACTACAGCTACTTCCTCTACCAGTGGGCCTTTGCCATCGCCGCCGCCGGAATCACCAGCGGCTCCATCGCCGAGAGAACGCAGTTCGTGGCTTACCTTATTTACTCATCTTTCCTAACCGGTTTCGTTTACCCCATCGTTTCGCATTGGATCTGGTCCTCAGACGGTTGGGCCAGCGCGACGCGGAGCGACGGAAACGTTTTATTCGGGTCCGGAGTCATCGACTTCGCGGGCTCAGGAGTTGTTCACATGGTTGGCGGGATAGCGGGCCTGTGGGGGGCTTTAATCGAAGGCCCGAGAATCGGCCGGTTCGACCGGACGGGCCGCTCCGTGGCTTTACGTGGCCACAGCGCGTCTTTAGTTGTGCTTGGTTCGTTTCTGTTATGGTTCGGATGGTACGGCTTCAACCCCGGTTCGTTTCTGATTATCGCGAAAGGGTATGGGAAAGGAGGGTACTATGGTCAATGGAGCGCGATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACTGCTGCTCTGACAACACTGTTCAGCAAGCGGTTATTGGTTGGGCACTGGAACGTGATTGACGTGTGCAACGGCCTGCTTGGCGGGTTCGCTGCCATAACCTCGGGCTGTGCCGTGGTGGAGCCGTGGGCCGCGATTGTGTGCGGGTTTGTGGCGGCGTGGGTTTTGATCGGGCTTAATTATCTGGCGGCGAAGATGGAGTACGATGATCCGTTGGAGGCGGCGCAGCTTCACGGGGGGTGTGGCGCGTGGGGGGTGCTGTTCACGGGCTTGTTTGCGAAGGGAGAGTACGTGGAGGAGATATACGGAATTGGAAGGCCGTTCGGGCTGTTGGTTGGAGGCGGTGGGAGGCTCCTGGCGGCGCAGGTGATTCAGATATTGGTGGTGAGTGGGTGGGTAACGGCGACGATGGCGCCGTTGTTCTACGGGCTTCATAAGATGAATCTGTTGAGGATATCGAGGGATGATGAAACTGCGGGAATGGACTTGACGAGGCATGGTGGGTTTGCATATGCATACCATGATGATGAAGATGGTTCAAGCAGGGGAGGAGGAGGATTCATGATGCGTAAAATAGAACCTGCTAGTGCATCTCCATCTCCCTCTCCCCCCGCTGCACCACAAGTAGTGTGA 1509 0.5785 MASLSCSANDLFNDTAAANYLCAQFDSISKKLADTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRDYPVPAGDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWIWSSDGWASATRSDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLIIAKGYGKGGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNYLAAKMEYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVEEIYGIGRPFGLLVGGGGRLLAAQVIQILVVSGWVTATMAPLFYGLHKMNLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGGGGFMMRKIEPASASPSPSPPAAPQVV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1888 502 Pfam Ammonium Transporter Family 43 463 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed8g1888 502 PANTHER AMMONIUM TRANSPORTER 12 496 - -
Aed8g1888 502 SUPERFAMILY Ammonium transporter 37 444 - -
Aed8g1888 502 Gene3D Ammonium transporter AmtB like domains 17 475 IPR029020 -
Aed8g1888 502 PANTHER AMMONIUM TRANSPORTER 12 496 - -
Aed8g1888 502 MobiDBLite consensus disorder prediction 474 502 - -
Aed8g1888 502 TIGRFAM amt: ammonium transporter 40 463 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed8g1888 502 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1888 Aed-Chr8 23551260 23552768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1888 19 495 Inorganic Solute Cotransporters AT1G64780 81.289 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1888 K03320 K07573 gmx:100797209 884.404