Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1884 ATGGAAATTACTCCTATTCTTCTTCTTCTGTGGCCGTTGTTGTTGTTCTGTTATCTTGTTCTCTGTGCTTCTGCCACCGATGTTGAATTCGACAACTGCAACTGTGATGACGGGGAAGGGATTTGGAGCATACATAGCATACTCGTTGGCCAAAAAGTCAGCGACTTTTTCATTGCCGTTGCATATTTTTCCATACCCATTGAACTCCTTTACTTCGTTAGCCGTTCAAACGTTCCATTCAAATTGCTCTTTCTTCAATTTATTGCCTTCATAGTGCTCTGTGGCTTGACCCATTTGCTCAATGCTTATTCTTATCATGGTCCTCCCTCCTTCCGGTTGTTGCTCTCCCTAACCGTCGCTAAATTCCTCACTGCTCTTGTTTCCTGCGCAACTGCTTTAACCCTTCCCCCTCTCATCCCTCTTCTCCTCAAAATCAAAGTTAGGGAACTTTTCCTGAGGCAGAATGTGATGGAGCTGGGCCAAGAGGTTGGGATTATGAAGAAACAGAAGGAGGCTAGCTGGCATGTTAGGATGCTCACTAGGGAAATTAGGAAGTCTCTTGATAAGCATAACATCCTCTACACCACCCTTGTTGAGCTTTCCAAGGCTTTGGATTTGCATAATTGTGCCGTTTGGATGCCCAACGAGGACCGGCGGGAGATGCACTTAACTCATGAGTTGAAAACAAACTCTGCCAAGAATTTTCAGAATTCTATTCCTGTGGTCGACCCTGATGTGTTGGAGATAAGAAAGACCAAGGGGGTGAAGATTTTGAGGCCTGATTCTGCTCTAGGAGCTGCGAGTGGCGGTGGCTCTGCGGAGTTGGGTGCTGTGGCGGCTATTCGCATGCCGTTACTTCATGTGTCGAATTTCAAAGGAGGGACTCCGGAGTTGATTGAGACGAATTATGCTATACTGGTTTTGGTTCTGCCAAGTTCAAGCACCAGGGGTTGGACCTACCATGAGATGGAGATAGTTGAAGTGGTTGCTGATCAGGTGGCTGTTGCCCTGTCTCATGCGTCAGTTCTTGAAGAGTCTCAGCTGATGAGACAGAAGCTGGAAGAGCGGAACCGAGCGTTGCAGCAGGCTAAGAAGAATGCAATGATGGCCAGCCAGGCAAGGAAGTCATTTCAGAAGGTGATGAGCCATGGAATGCGGAGGCCTATGCATTCTATTCTGGGGATGCTTTCATTGTTTCAAGAGGATAATTTGAGGTCTGAGCAGAAGATTATTAGTGATACAATGTTGAATGTTGGCCATGTGCTCTCAAGTTTGATTAATGATGTAATGGAGATTTCAGAAAATGAAAAGGGAGGCTTCCGGTTAGAGATGAAACCTTTCCCTCTGCACTCGATGATGAGGGAAGCTGCTTGCATTGCCAAGTGCTTGTGTGTTTATGAAGGCTTTGGTTTTGAAATTGATGTCCAGAAGTCTTTGCCTGAAACCGTTATGGGTGATGAGGCAAGGACTTTTCAAGTTATTTTACACATGATTGGCTATTTATTGAACATGAATCACAAAGGGACTCTCAATTTTCGAGTTTTTCTTGAAAGTGATGGTGGAGATAAGGATGATAAAAGTATTGGGATATGGAGATCAAGCAGTCAAAATGAGTCTGTACATATAAAATTTGATTTTCAGATTATTGATAGTTCTCAGTCAGATGAAGCAATTTCAACAATACATTATACTGGTAGGAGGCAGTACTACAACAATGAACCTAAGGATGGCCTGAGCTTCAGCATGTGCAAAAAGTTGGTACAGATGATGCAAGGTAATATATGGGTATCACCGAACTCCATGGGTTTGGTTCAAGGCATGACACTTCTTCTTAAGTTTCCGAAGGGACCATCACTTGAAAAATCCATATTTGCACCTAAAGATTATTCAAGCTCACAGTTCAGAGGCCTTAAGATTGTGTTAGCCGAGGACGATGGTATGAACCGGACCGTGACCAAGAAGCTTCTCGAAAAGCTTGGTTGTCAAGTAACTGCTGTTTCATCAGGGTTTGAGTGCCTGAGTGCTATAAGTGGCACCGGTAACTCATTCAGAATCATCATGTTGGATCTTCACATGCCCGAAATGGATGGTTTTGAAGTGGCAAAGAGGATCCGGAAGTTCCATAGCAGTAGCTGGCCATTGATTATAGCACTTATAGCAAGTGCAGAGGAACATGTGAGGGAGAAATGCCTTCTTGCCGGAATGAATGGATTGATCCAAAAACCTATCGTACTTCATCAGATGGCAGATGAACTTAGAACAGTTCTACAAAGAGCAGGTGAAAAACTGTGA 2292 0.4407 MEITPILLLLWPLLLFCYLVLCASATDVEFDNCNCDDGEGIWSIHSILVGQKVSDFFIAVAYFSIPIELLYFVSRSNVPFKLLFLQFIAFIVLCGLTHLLNAYSYHGPPSFRLLLSLTVAKFLTALVSCATALTLPPLIPLLLKIKVRELFLRQNVMELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHNILYTTLVELSKALDLHNCAVWMPNEDRREMHLTHELKTNSAKNFQNSIPVVDPDVLEIRKTKGVKILRPDSALGAASGGGSAELGAVAAIRMPLLHVSNFKGGTPELIETNYAILVLVLPSSSTRGWTYHEMEIVEVVADQVAVALSHASVLEESQLMRQKLEERNRALQQAKKNAMMASQARKSFQKVMSHGMRRPMHSILGMLSLFQEDNLRSEQKIISDTMLNVGHVLSSLINDVMEISENEKGGFRLEMKPFPLHSMMREAACIAKCLCVYEGFGFEIDVQKSLPETVMGDEARTFQVILHMIGYLLNMNHKGTLNFRVFLESDGGDKDDKSIGIWRSSSQNESVHIKFDFQIIDSSQSDEAISTIHYTGRRQYYNNEPKDGLSFSMCKKLVQMMQGNIWVSPNSMGLVQGMTLLLKFPKGPSLEKSIFAPKDYSSSQFRGLKIVLAEDDGMNRTVTKKLLEKLGCQVTAVSSGFECLSAISGTGNSFRIIMLDLHMPEMDGFEVAKRIRKFHSSSWPLIIALIASAEEHVREKCLLAGMNGLIQKPIVLHQMADELRTVLQRAGEKL 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1884 763 SMART gaf_1 188 347 IPR003018 GO:0005515
Aed8g1884 763 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 442 614 IPR036890 -
Aed8g1884 763 PANTHER TWO-COMPONENT HISTIDINE KINASE 10 756 - -
Aed8g1884 763 Coils Coil 343 373 - -
Aed8g1884 763 Pfam His Kinase A (phospho-acceptor) domain 375 437 IPR003661 GO:0000155|GO:0007165
Aed8g1884 763 Pfam Response regulator receiver domain 639 750 IPR001789 GO:0000160
Aed8g1884 763 ProSiteProfiles Histidine kinase domain profile. 380 617 IPR005467 -
Aed8g1884 763 SUPERFAMILY GAF domain-like 192 340 - -
Aed8g1884 763 CDD HATPase_ETR2_ERS2-EIN4-like 479 611 - -
Aed8g1884 763 Gene3D - 339 436 - -
Aed8g1884 763 Pfam GAF domain 190 337 IPR003018 GO:0005515
Aed8g1884 763 PANTHER ETHYLENE RECEPTOR 10 756 - -
Aed8g1884 763 PIRSF Ethylen_sen_hybr_HK 6 763 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Aed8g1884 763 Gene3D - 637 762 - -
Aed8g1884 763 SMART REC_2 637 752 IPR001789 GO:0000160
Aed8g1884 763 CDD REC_ETR-like 637 752 - -
Aed8g1884 763 Gene3D - 437 616 IPR036890 -
Aed8g1884 763 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 358 438 IPR036097 GO:0000155|GO:0007165
Aed8g1884 763 ProSiteProfiles Response regulatory domain profile. 638 756 IPR001789 GO:0000160
Aed8g1884 763 SMART HisKA_10 373 438 IPR003661 GO:0000155|GO:0007165
Aed8g1884 763 Gene3D - 166 338 IPR029016 -
Aed8g1884 763 SUPERFAMILY CheY-like 633 758 IPR011006 -
Aed8g1884 763 CDD HisKA 371 433 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1884 Aed-Chr8 23511139 23519030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1884 27 761 Miscellaneous Gene Families AT3G04580 61.497 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed8g1884 GAF 7e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1884 K14509 - gmx:100101892 1363.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1884 8 23511139 23519030 Aed8g1884 8 23511139 23519030 ECH