Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1883 ATGTCGAACCGGTGGTGGACCGGGGCTCTGGGTCTGGAGAACTCTGGCGACTCCATGAAAAAACCGGATCTGGGGTTTTCCATGAACGAGAGTGCGGTCACAGGGAACCATATGGGAGATGAAGAAGATGAGAGAGAGAACAGCGACGAGCCCAGAGAGGGAGCTATCGACGTGGCCAACACGCGCCGCCCCAGGGGCCGTCCACCTGGCTCCAAAAACAAGCCCAAGCCGCCGATATTCGTCACCCGAGACAGCCCTAACGCGCTGCGAAGCCACGTCATGGAGATAGCAGCCGGAGCCGACATCACCGACTGCGTGGCGCAGTTCGCACGGAGGCGCCAGCGCGGCGTCTCCATTCTCAGCGGCAGCGGCGCTGTCGTCGACGTTACTCTCCGCCAGCCCACGGCGCCCGGCGCCGTCATGGCCCTCCACGGCCGCTATGACATCCTCTCACTCACCGGCTCGTTCCTGCCCGGTCCGTCCCCTCCCGGCGCAACCGGGCTGACCATCTATCTCACCGGAGTCCAGGGACAGATCGTGGGCGGCGGGGTGGTGGGTCCGCTCGTGGCGGCGGGTCCCGTTTTGATAATGGCGGCTACGTTTTCCAATGCAACGTACGAGAGATTGCCCTTGGAGGATGATGATCAGGAACAGGGCGGCGGTCAGGGCGAGGCATCGTCGTCGATTTCGGTGTATAACAACAATGTTCCTCCGAGTTTAGGTGTTCCGAATGGGCAGCACCCGAACCAGGAAGCATACTCTACACCTTGGGGTCATGCTCCTCATGCCAGACCTCCTTTCTAA 804 0.6169 MSNRWWTGALGLENSGDSMKKPDLGFSMNESAVTGNHMGDEEDERENSDEPREGAIDVANTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEIAAGADITDCVAQFARRRQRGVSILSGSGAVVDVTLRQPTAPGAVMALHGRYDILSLTGSFLPGPSPPGATGLTIYLTGVQGQIVGGGVVGPLVAAGPVLIMAATFSNATYERLPLEDDDQEQGGGQGEASSSISVYNNNVPPSLGVPNGQHPNQEAYSTPWGHAPHARPPF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1883 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Aed8g1883 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 13 250 - -
Aed8g1883 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 214 - -
Aed8g1883 267 MobiDBLite consensus disorder prediction 212 267 - -
Aed8g1883 267 ProSiteProfiles PPC domain profile profile. 86 226 IPR005175 -
Aed8g1883 267 Gene3D - 89 218 - -
Aed8g1883 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 13 250 IPR014476 GO:0003680
Aed8g1883 267 MobiDBLite consensus disorder prediction 1 86 - -
Aed8g1883 267 CDD DUF296 90 172 IPR005175 -
Aed8g1883 267 PIRSF ESCAROLA 12 264 IPR014476 GO:0003680
Aed8g1883 267 MobiDBLite consensus disorder prediction 220 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1883 Aed-Chr8 23501781 23502584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1883 1 267 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 52.318 3.54e-81 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1883 - - gmx:100795097 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1883 8 23501781 23502584 Aed8g1883 8 23501781 23502584 ECH