Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1867 ATGGCTCCTAATCCAAGAGTCATTAAGGCTTATAATGCTATGAGGCCCTTAGGAATTTCTGATGAAGAGGTGAAACCGGTGTTGAAAAATTTGTTACAATTGTATGATAGAAACTGGGAACTTATTGAAGAAGACAATTATCGTACACTTATAGATGCATACTTTGAGTTAAAGGAAGATAAGCAAGCAGAAGGTAAGAGAAAGGCTCCAACGAGTTATCTTGATGGGAAAAGGCCTAAACAGGAACTGCACTTGGTAGATGGAGATGACCAGGTTGCATCAACTGACAACTCAAGACCAGGGTTGTCTGTAGCGGACACGGAAATACCTCCCAACGTTTTTAAACAGGAAATCATTAAACCTTCTCAAACCTCCATTGGACATATGAAGCCCACGACCAGTTCACAAGCATTGCAGACAATGCCGAGTAAGGTAGAAAGGATCTCAAATTTACCCTGCATGGCTGCTAGAGATATAAAATTGCATTGTGAAGATTCAATTGATGGACCAAGCAATCCTCGTATCCAGAGGAAAAATATATCAAGTGATCATCATCAGAAGGAGTTGATGACACCAAGAACTGAGAAACATAAGTCACATCTTGGACCTGTTTCAACGAGTTACAACGCTCTGTATCAGAATGTGCACAAGAAAGATGGTAGCTCAGCATACAGTGATAACAACAGAATTCAGAATGGTAATATTGACATTGCCTCTTCACCTTTGGGAGAAATTAAAATTTCTTTAAACTGCGAGGCTGCTTTGGGACAAACAAACTTCCGTATTCCTGATTTGGATGCTGTTATGAAGTCTATGGAGGAGAAATACCTGAAGTATTACAAGATCGTCGATCCTGAATCATCTATGGTGAAGCTATTAGATGATTTATGTGGACGTTACTTGAAGCTGGGCTTGAATTTAATTCGAAAGGGGTCAACTCCCAAGTATGGTAATTCACGTAATGTGGCATGTCTGCCACCGCAAGCTGTTGCTGAAGATGACAAAAAACCTTCTCACTTTGTCGATGACATAACAAAAGGTTCAGAGAATGTTAAAATATCATTATTAGATGGAACTGGAAATGAGGACTTGCCAAAGTTTAATTACATACCCTATAATGTAATATATCAAGATGCCAACGTAAATATTTCACTTGCCCGTATTGCGGATGAGGGTTGCTGTGCTGATTGTGCTGGCAACTGTCTTTCCTCATCACTTCCTTGTGCATGTTCTCAAGAAACAGGTGGAGAGTTTGCTTACAATCCACAAGGCTTGTTGAAGGAAGAGTTTTTAAAAGCTTGCATTTCTATGAAATTGGAGCCTCAAGATCACCATTTTGTGTATTGCCAAGAATGCCCACTGGAGAGGACTAAGAATGACATCATGCCCGAACCATGCAAGGGGCATCTGGTTAGGAAGTTTATCAAGGAATGCTGGAGAAAATGTGGTTGTGACATGCAGTGTGGAAATCGGCAGCCATTGTTGTTTGTTGCTACATTTCTTTTGTTTTTGACTCGAGAAGGAAAGGGATGGGGGGTCAGAACACTAGAAGATTTGCCTAAGGGATGCTTTGTATGTGAATATGCTGGGGAAATATTAACCAATACAGAATTATATGAAAGGATTACGCAGACAAGCGGCAATGACAGGCATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCTGAAGGGGTGTTAAAGGATGAGGAGGCACTATGCTTAGATGCAACATATAATGGAAATGTTGCAAGGTTTATCAATCATAGATGCTCGGACGCAAATCTGATAGACATTCCAGTTGAAGTAGAGACGCCTGATCGTCACTATTATCATGACTATGGTATTGACTTCGATGATCATGAGCACCCCATTAAAGCATTTAGTTGCTGTTGTGGAAGTGCCTTCTGCCGTGATAATAAACAAAAAGGAAATAGCTTATTGAAAAGTAAAAAACTCAAGGAGATACATACCACACAGACGGGTTACCACCCGTTTGCTGGAGCAGCGAATGCTGGTCATATGACTCATATAGATGACTTTTTTCCTGCAAAAAGTAATTAG 2064 0.405 MAPNPRVIKAYNAMRPLGISDEEVKPVLKNLLQLYDRNWELIEEDNYRTLIDAYFELKEDKQAEGKRKAPTSYLDGKRPKQELHLVDGDDQVASTDNSRPGLSVADTEIPPNVFKQEIIKPSQTSIGHMKPTTSSQALQTMPSKVERISNLPCMAARDIKLHCEDSIDGPSNPRIQRKNISSDHHQKELMTPRTEKHKSHLGPVSTSYNALYQNVHKKDGSSAYSDNNRIQNGNIDIASSPLGEIKISLNCEAALGQTNFRIPDLDAVMKSMEEKYLKYYKIVDPESSMVKLLDDLCGRYLKLGLNLIRKGSTPKYGNSRNVACLPPQAVAEDDKKPSHFVDDITKGSENVKISLLDGTGNEDLPKFNYIPYNVIYQDANVNISLARIADEGCCADCAGNCLSSSLPCACSQETGGEFAYNPQGLLKEEFLKACISMKLEPQDHHFVYCQECPLERTKNDIMPEPCKGHLVRKFIKECWRKCGCDMQCGNRQPLLFVATFLLFLTREGKGWGVRTLEDLPKGCFVCEYAGEILTNTELYERITQTSGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHDYGIDFDDHEHPIKAFSCCCGSAFCRDNKQKGNSLLKSKKLKEIHTTQTGYHPFAGAANAGHMTHIDDFFPAKSN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1867 687 CDD SET_SETDB-like 365 612 - -
Aed8g1867 687 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 672 IPR025776 -
Aed8g1867 687 MobiDBLite consensus disorder prediction 178 200 - -
Aed8g1867 687 SMART preset_2 341 483 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed8g1867 687 Gene3D - 1 60 IPR043017 -
Aed8g1867 687 ProSiteProfiles SET domain profile. 498 636 IPR001214 GO:0005515
Aed8g1867 687 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Aed8g1867 687 Gene3D SET domain 327 614 IPR046341 -
Aed8g1867 687 Pfam Pre-SET motif 344 491 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed8g1867 687 SUPERFAMILY SET domain 351 638 IPR046341 -
Aed8g1867 687 MobiDBLite consensus disorder prediction 164 201 - -
Aed8g1867 687 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 658 - -
Aed8g1867 687 MobiDBLite consensus disorder prediction 61 109 - -
Aed8g1867 687 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 658 - -
Aed8g1867 687 SMART set_7 498 621 IPR001214 GO:0005515
Aed8g1867 687 Pfam SET domain 510 596 IPR001214 GO:0005515
Aed8g1867 687 MobiDBLite consensus disorder prediction 61 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1867 Aed-Chr8 23377265 23382650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1867 475 612 C2H2 Transcription Factor Family AT2G23740 39.568 1.99e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed8g1867 Pre-SET 2.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1867 - - gsj:114402909 1114.75