Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1860 ATGAAAAATGCAACAAGATTAAGAGGAACCAAACCATCGCAAAGAGAACCACCAACCACCAAAATGCAAACCAAACTACTGTTCTTCTTCTTCTTCTATTGTTGCATTGCTCTCTCACTTGTTTTTGCTGAAGCTGCAACAACAGATGATGAATTGTCAACTCTTCTCTCAATCAAATCCACTCTCATTGACCCAATGAAGCATCTGAAGGATTGGCAATGGCAACTACCAAGCAATGTGACACAGCCAGGTTCACCTCATTGCAACTGGACTGGAGTTGGTTGCAACTCTAAAGGCTTTGTAGAGAGCCTTGACCTCTCCAACATGAACCTCAGCGGCCGCGTCTCAGACCGCATTCAATCTCTTTCAAGCCTGTGTTGTTTCAACATAAGCTGCAACAACTTTGCTTCATCACTGCCCGAATCACTGTCCAACCTCACCTCTCTCAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCTGCTGGTCTTGGAGGAGCTGCAGGCTTGAGATCAATCAATGCTTCAAGCAACGAATTTTCGGGTTTTCTTCCCGAGGATATTGGAAATGCAGCATTGCTTGAAAGCCTTGATTTTCGAGGGAGCTACTTTGTGAGTCCAATTCCCATGAGTCTTAAGAATCTGCAGAAGCTACAGTTTCTAGGTCTTTCAGGAAATAACTTCACAGGGAAGATTCCAATATATATTGGGGAACTCACTTCTCTGGAGACATTGATTATAGGATACAATTTGTTTGAAGGAGAGATCCCTGCAGAGTTTGGCAACCTCACTAATCTTCAATACATTGACTTGGCTGTAGGTAGTCTCAGTGGAGAAATTCCAGCTGAATTAGGTAAGCTAACAAAACTCACAACAATTTATTTGTACCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTACTTCACTGGAATTTTTGGACCTCTCTGACAATCAGATCTCTGGAGAGATTCCAGAAGAACTTGCTGAATTGGAAAACCTGAAGCTCTTAAATCTGATGAACAACAAATTAACTGGTCCAGTACCAGAGAAGCTTGGTGAATTGAAAAACTTACAGGTGCTTGAGCTATGGAAAAATTCTTTACATGGTCCTTTGCCACCAAACCTTGGACAGAACTCTCCTTTGGTGTGGTTGGATGTGTCCTCTAACTCACTATCCGGGGATATCCCTCCAGGTTTGTGTACAACAAGCAATCTCACTAAACTAATTCTCTTTAACAATTCCTTCACTGGTGTCATTCCAAGTGGACTTGCAAATTGTTCGTCTTTGGTACGTGTTCGGATTCAGAACAATTTTATTTCTGGAACTGTTCCAGTTGGCTTTGGAAGCCTCCTTGGCCTTCAACGGCTGGAGTTGGCGAAGAACAACCTCACTGGGAAAGTTCCTACTGATATCACCTCATCCAGATCACTCTCTTTCATTGATGTATCTTGGAACCACCTTGAGTCCTCTCTACCTTCAGATATTCTTTCCATTCCAACCCTTCAAAGCTTCATTGCCTCTCATAACAATTTTGGAGGAAATATCCCAGATGAGTTCCAGGACTGTCCATCTCTCTCTGTGCTGGATCTTTCAAGCACCCATATATCAGGCACAATCCCTGAAAGCATTATTTCTTGTAAAAAATTAGTCAACCTTAACCTTCGAAATAACCTTTTGACCGGTGAAATCCCAAAATCAATCACAAACATGCCTACCTTATCTGTTCTTGATCTGTCAAACAACTCACTAACTGGCAGGATACCTGAAAATATTGGCAACTCCCCAGCTCTCGAAATGTTGAACCTTTCCTATAACAAACTTGAGGGTCCCGTACCCTCAAATGGGATGTTGGTGACCATAAATCCTAATGATCTTATTGGCAATGAGGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCAAGCATGGCTGTGACAAGCCATCGACGACGGAGCTCACATATCAGACACGTCGTTATCGGTTTTGTGATCGGCATTGCAGTGATTTTAGCTCTTGGTGCAGTGTATTTTGGTGGGAGATGTTTATACAAGAGATGGCACCTGTATAACAATTTCATCCACGATTGGTTCAAGCAGAGCAACGAGGATTGGCCGTGGAGGCTAGTAGCGTTCCAGAGGATAAGTTTCACTAGTAGTGACATCCTTGCATGCATAAAGGAATCAAATGTGATAGGCATGGGGGGCGCTGGAATTGTTTACAAAGCAGAAATCCATAGACCTCACGTAACCGTGGCAGTGAAGAAACTATGGCGATCACGGTCACGGACGACAGACATAGAAGATGGGAATGAAGTGTTGAGAGAAGTGGAACTTCTGGGGAGACTTAGGCACAGGAATATTGTGAGAGTGTTGGGGTATGTACACAATGAAAGGGATGTGATGATGGTTTACGAGCACATGACTAATGGGAATCTAGGAACAGCACTGCATCATGGTGAAGAATCTGCGAGGTTGCTTGTTGATTGGGTCTCAAGGTACAACATAGCTCTTGGTGTTGCACAAGGGCTTAACTACCTCCACCATGATTGCCACCCACCGGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGATGCTAATTTGGAGGCGAGAATAGCAGATTTCGGGTTGGCGAGGATGATGATTCAAAAGAATGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATCGCACCAGAATATGGATATACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTACGGAGTGGTGCTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACCCTTCGTTTGAAGAATCAATTGACATAGTCGAATGGATTAGGAAGAAGCAAAGCAATAAAGCCTTGTTAGAAGCACTAGATCCAGCTATAGCTACTACTCAGTGCAAACATGTACAAGAAGAAATGATGCTTGTACTCCGGATTGCACTTCTATGTACAGCAAAGCTTCCCAAGGAAAGACCACACATGAGAGACGTCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGCCAATGGGGTGCAAGACAGCAGTAACGTGGAAAAGCCAACAATCTTTACCACTTCCCCAGTAATCAGCCTTTTGTAG 3153 0.4345 MKNATRLRGTKPSQREPPTTKMQTKLLFFFFFYCCIALSLVFAEAATTDDELSTLLSIKSTLIDPMKHLKDWQWQLPSNVTQPGSPHCNWTGVGCNSKGFVESLDLSNMNLSGRVSDRIQSLSSLCCFNISCNNFASSLPESLSNLTSLKSFDVSQNYFTGSFPAGLGGAAGLRSINASSNEFSGFLPEDIGNAALLESLDFRGSYFVSPIPMSLKNLQKLQFLGLSGNNFTGKIPIYIGELTSLETLIIGYNLFEGEIPAEFGNLTNLQYIDLAVGSLSGEIPAELGKLTKLTTIYLYHNNFTGKIPPQLGNITSLEFLDLSDNQISGEIPEELAELENLKLLNLMNNKLTGPVPEKLGELKNLQVLELWKNSLHGPLPPNLGQNSPLVWLDVSSNSLSGDIPPGLCTTSNLTKLILFNNSFTGVIPSGLANCSSLVRVRIQNNFISGTVPVGFGSLLGLQRLELAKNNLTGKVPTDITSSRSLSFIDVSWNHLESSLPSDILSIPTLQSFIASHNNFGGNIPDEFQDCPSLSVLDLSSTHISGTIPESIISCKKLVNLNLRNNLLTGEIPKSITNMPTLSVLDLSNNSLTGRIPENIGNSPALEMLNLSYNKLEGPVPSNGMLVTINPNDLIGNEGLCGGILPPCSPSMAVTSHRRRSSHIRHVVIGFVIGIAVILALGAVYFGGRCLYKRWHLYNNFIHDWFKQSNEDWPWRLVAFQRISFTSSDILACIKESNVIGMGGAGIVYKAEIHRPHVTVAVKKLWRSRSRTTDIEDGNEVLREVELLGRLRHRNIVRVLGYVHNERDVMMVYEHMTNGNLGTALHHGEESARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPSFEESIDIVEWIRKKQSNKALLEALDPAIATTQCKHVQEEMMLVLRIALLCTAKLPKERPHMRDVITMLGEAKPRRKSVCHNANGVQDSSNVEKPTIFTTSPVISLL 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1860 1050 Pfam Protein kinase domain 735 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1860 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Aed8g1860 1050 SUPERFAMILY L domain-like 386 641 - -
Aed8g1860 1050 PANTHER UNNAMED PRODUCT 28 1029 - -
Aed8g1860 1050 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 28 1029 - -
Aed8g1860 1050 PRINTS Leucine-rich repeat signature 578 591 - -
Aed8g1860 1050 PRINTS Leucine-rich repeat signature 317 330 - -
Aed8g1860 1050 ProSiteProfiles Protein kinase domain profile. 733 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1860 1050 Gene3D Ribonuclease Inhibitor 266 405 IPR032675 -
Aed8g1860 1050 Pfam Leucine rich repeat N-terminal domain 49 96 IPR013210 -
Aed8g1860 1050 Pfam Leucine rich repeat 436 495 IPR001611 GO:0005515
Aed8g1860 1050 Pfam Leucine rich repeat 556 615 IPR001611 GO:0005515
Aed8g1860 1050 SMART serkin_6 733 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1860 1050 ProSiteProfiles Leucine-rich repeat profile. 316 339 IPR001611 GO:0005515
Aed8g1860 1050 Gene3D Ribonuclease Inhibitor 50 170 IPR032675 -
Aed8g1860 1050 SMART LRR_typ_2 314 338 IPR003591 -
Aed8g1860 1050 SMART LRR_typ_2 578 602 IPR003591 -
Aed8g1860 1050 SMART LRR_typ_2 146 170 IPR003591 -
Aed8g1860 1050 SMART LRR_typ_2 218 242 IPR003591 -
Aed8g1860 1050 SMART LRR_typ_2 362 386 IPR003591 -
Aed8g1860 1050 SMART LRR_typ_2 290 313 IPR003591 -
Aed8g1860 1050 Gene3D Ribonuclease Inhibitor 406 648 IPR032675 -
Aed8g1860 1050 Gene3D Phosphorylase Kinase; domain 1 733 818 - -
Aed8g1860 1050 SUPERFAMILY Protein kinase-like (PK-like) 729 1012 IPR011009 -
Aed8g1860 1050 Gene3D Ribonuclease Inhibitor 171 265 IPR032675 -
Aed8g1860 1050 SUPERFAMILY RNI-like 103 448 - -
Aed8g1860 1050 Gene3D Transferase(Phosphotransferase) domain 1 819 1036 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1860 Aed-Chr8 23287364 23290621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1860 22 1050 Receptor kinase-like Gene Family AT1G08590 63.567 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed8g1860 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1860 - - gmx:100793873 1804.65