Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1857 ATGGTAATAAAAATAATGATTCCATATCTCAATCTGCAGGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGATGTATCTTGGATTGATGGACAGGTATTAAAAATCAATGGAAAGGATGCTGAAATTGAAGCTACCGATGGAAAAAAGGTTGTTGCAAATTTATCAAAAATATATCCTAAGGATATGGAAGCTCCTCCCGGTGGAGTGGATGATATGACTAAACTGTCCTATTTGCATGAGCCTGGAGTCCTGCAGAACTTAAAAGCTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGGTGCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAATTAAGCCCCCATGTGTTTGCAGTTGCTGATGTTGCATATAGGGCGATGATTAACGAAAAAAAAAGCAATTCAATTCTAGTCAGTGGGGAAAGTGGAGCTGGCAAAACTGAAACTACAAAAATGCTTATGCAGTACCTTGCTTTCTTAGGTGGTAGGGCTGGTACTGAAGGGCGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGGAATGCTAAAACTGTCAGGAATAACAATTCTAGAAAAGGATTTTTTGTTAACATAAACTGCTACATCATACTTAATGAAATTGAGAAATACAAATTAGGAAATCCTAAATCATTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGATGTAAGTGATGCCCGTGAATATCTTGCCACCCGGAGAGCTATGGACATTGTTGGAATAAGTCAAAAAGATCAGGAAGCCATTTTCAGAGTTGTTGCTTCAATTCTTCATATTGGTAATATTGAATTTGCCAAAGGAAAAGATATTGATTCATCAGTTCCAAAAGATGACCAATCCAAATTCCACCTGAAAACAACTGCTGATCTTCTCATGTGTGATGTTGATGCCTTGGAAGACGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGACCCCCAAAGTGCAGCAATCAGTAGAGATGGATTGGCAAAAACAATCTATTCTCGGCTATTTGACTGGTTGGTGGACAAGATTAATAATTCCATTGGACAAGACCCCAATTCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAGCTAACAGTTTCGAGCAATTTTGCATTAATTTCACCAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAAGTCCAAGAACAAGCTATGCACTTCAAGTTTGTTTGCTATTTCCATTATTAATAAGTTGGTGATGATGAATTTCAGCACGTGTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAGAAGAAACCTGGAGGAATCATTGCTCTCCTTGATGAAGCTTGGTAATTTTTTCATGTTTCCGAAGTCAACTCATGAAACATTTGCAAACAAGCTTTATCAAACATTTAAGAACCACAAGCGCTTTATTAAGCCAAAATTGTCTCAAACAGATTTCACAATTGCTCATTATGCTGGGGAGGTATTATACCAGTCTGAACAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCCAAATGTTCTTTTGTTTCTGGCCTTTTTCCACAACTTCCAGAAGAGGCATCAAAATCTTCCAAATTCTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAAAGCCTAATGGAGACATTAAATTCTACAGAACCCCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCAGCAATTTTCGAGAATATCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTGGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTATAAACAGATTTGGCCTCCTTGCTCCAGAGGCCATGGAAGCAAACTGTGATGAGAAGACTGGTTGCCAAAAGATTCTGGAAAAAATGGGGCTTCAAGGATATCAGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTTGATGCACGGAGAGCTCAAGTACTTAGTAATGCAGCAAAAGTTCTCCAACGGCGCATACGAACCCATCAAGCTCGTAAACATTATCTTGCATTGCGAAAGAAAAGCATATATGTGCAGTCTCGGTGGAGAGGGAGACTTGCATGTAAACTCTATGATCACATGAGAAGGGAGGCTGCTGCTTTGAAAATTCAAAAGAACATACGCAGATATGAAACTAGGAAAGCTTATAAAGAACTTCATGTGTCAGCACTTACACTGCAAACAGCTATAAGGGCTGTTGCTGCTCGCAAGAAATTCAGATATATGAAGCAGAATAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCCTTATATTATAAGAGGCTCAAGAAAGGTGCGATATTTACACAATGCAGATGGAGGGGGCGCATAGCCAGGAAAGAACTCAGGAAAATGAAAATGGCTGCAAGAGAAACTGGTGCCCTTCAAGAAGCAAAGGATAAACTAGAAAAACGAGTAGAGGAGCTCACTTGGCGTTTCCAACTAGAAAAAGGTTTAAGGACCAATCTGGAAGAATCCAAAGCACAGGAGATAGCAAAAATGCAGAACGCATTGCAGGAGATGCAGAATAAATTTGAAGAAACTAATGCTTTGCTCATCAAAGAGCGAGAGAATGTGAAGAAAGTTGTTGAAGAAGCACCTCCTGTCATTAAAGAAACACAGGTTATTGTTGAAGATACACAGAAGGTTGAGACACTGACTGCAGAAGTTGAGAACCTAAAGACTTCACTCGAGGCAGAGAAGCAGAAAGCTGATGACTTTGAAAGAAAATACAATGAAGCCCAAGTTTGTAGTGAACAAAGAGGTAAAAAACTAGAAGACACGGAGAAGAAGGCACGTCAGATTCAAGAGTCATTGACTAGGCTAGAAGAGAAGATCACTAATTTAGAATCGGAGAATCAGGTCCTACGTCAACAAGCTGTGTCCATGGCACCTACTACTAATAAGTTCCTTTCGGGACGTTCAAGATCAGTTATCCAGAGAACTGAAAGTGGTCATATTATACCGGAACCAAAGACACCTCTGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAGCGCACGCTCAAGGCTAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTTCATCAGCAACCCTGTTTGGGAGGATGACTCAAAGTTTCCGTGGAACTCCAGCTGGAGCCAATCTTTCCATAATCAATGGTAGCACAAGCAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTCTGCTTTTCAAACAACAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAATTTGAAGAAAGAAATTTCTCCCTTACTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCCTTGTTAAGGGATCATCACGTTCAGTTGCAAACACCGAAGCCCAACGTGCTTTGATTGCTCATTGGCAGGGGATAGTGAAGAGCCTAGGAAACTTTCTAAATACTTTGAAAGCAAATCATGTTCCTCCATTTTTAGTTCGTAAGGTGTTCACACAAATTTTTTCTTTCATCAATGTACAATTATTCAATAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTCAAAGCTGGTTTGGCTGAATTAGAGCATTGGTGTTATAAGGCAACAGATGAGTATGCAGGTTCAGCCTGGGATGAGCTCAAACATATTAGACAAGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACATTGGATGAAATAAGCCATGACCTGTGCCCAGTCCTTAGTATACAGCAGCTATATCGGATAAGCACCATGTATTGGGATGACAAATATGGAACGCATAGTGTGTCCTCCGATGTCATATCCAATATGAGAGTATTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCGAAATCAATGGAACAGATAGATATCTCAGATATAGAGCCCCCGCCACTAATTCGTGAAAACTCAGGCTTTAGCTTTTTGTTGCCGCGCCCAGATTGA 4350 0.3975 MVIKIMIPYLNLQGTPVNIIVGSHVWIEDPDVSWIDGQVLKINGKDAEIEATDGKKVVANLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYGAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEKKSNSILVSGESGAGKTETTKMLMQYLAFLGGRAGTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSRKGFFVNINCYIILNEIEKYKLGNPKSFHYLNQSKCYELADVSDAREYLATRRAMDIVGISQKDQEAIFRVVASILHIGNIEFAKGKDIDSSVPKDDQSKFHLKTTADLLMCDVDALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQAKSKNKLCTSSLFAISIINKLVMMNFSTCLKWNKKNIQRSRSIGATLNLLTTKMFWTLLRRNLEESLLSLMKLGNFFMFPKSTHETFANKLYQTFKNHKRFIKPKLSQTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLSASKCSFVSGLFPQLPEEASKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENINIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGLLAPEAMEANCDEKTGCQKILEKMGLQGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKVLQRRIRTHQARKHYLALRKKSIYVQSRWRGRLACKLYDHMRREAAALKIQKNIRRYETRKAYKELHVSALTLQTAIRAVAARKKFRYMKQNKASIIIQARWRCHKAALYYKRLKKGAIFTQCRWRGRIARKELRKMKMAARETGALQEAKDKLEKRVEELTWRFQLEKGLRTNLEESKAQEIAKMQNALQEMQNKFEETNALLIKERENVKKVVEEAPPVIKETQVIVEDTQKVETLTAEVENLKTSLEAEKQKADDFERKYNEAQVCSEQRGKKLEDTEKKARQIQESLTRLEEKITNLESENQVLRQQAVSMAPTTNKFLSGRSRSVIQRTESGHIIPEPKTPLTQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPAGANLSIINGSTSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRPD 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1857 1449 SMART AAA_5 160 306 IPR003593 -
Aed8g1857 1449 ProSiteProfiles Myosin motor domain profile. 74 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 Gene3D - 836 885 - -
Aed8g1857 1449 Gene3D - 789 835 - -
Aed8g1857 1449 Gene3D - 737 788 - -
Aed8g1857 1449 ProSiteProfiles IQ motif profile. 809 838 IPR000048 GO:0005515
Aed8g1857 1449 ProSiteProfiles IQ motif profile. 738 765 IPR000048 GO:0005515
Aed8g1857 1449 Coils Coil 1020 1054 - -
Aed8g1857 1449 ProSiteProfiles IQ motif profile. 786 815 IPR000048 GO:0005515
Aed8g1857 1449 PANTHER MYOSIN-9 239 439 - -
Aed8g1857 1449 Gene3D - 670 736 - -
Aed8g1857 1449 Gene3D - 412 626 - -
Aed8g1857 1449 PANTHER MYOSIN 239 439 - -
Aed8g1857 1449 CDD MYSc_Myo11 88 723 IPR036018 -
Aed8g1857 1449 Pfam IQ calmodulin-binding motif 836 855 IPR000048 GO:0005515
Aed8g1857 1449 Pfam IQ calmodulin-binding motif 740 758 IPR000048 GO:0005515
Aed8g1857 1449 Pfam IQ calmodulin-binding motif 788 807 IPR000048 GO:0005515
Aed8g1857 1449 Pfam IQ calmodulin-binding motif 859 878 IPR000048 GO:0005515
Aed8g1857 1449 Gene3D - 240 283 - -
Aed8g1857 1449 ProSiteProfiles Dilute domain profile. 1063 1392 IPR002710 -
Aed8g1857 1449 PANTHER MYOSIN-9 1091 1446 - -
Aed8g1857 1449 Gene3D Myosin VI head, motor domain, U50 subdomain 285 604 - -
Aed8g1857 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 788 IPR027417 -
Aed8g1857 1449 Pfam Myosin N-terminal SH3-like domain 21 63 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 Pfam Myosin head (motor domain) 240 438 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 Pfam Myosin head (motor domain) 76 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 Pfam Myosin head (motor domain) 511 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 ProSiteProfiles IQ motif profile. 834 860 IPR000048 GO:0005515
Aed8g1857 1449 PRINTS Myosin heavy chain signature 402 430 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 PRINTS Myosin heavy chain signature 104 123 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 PRINTS Myosin heavy chain signature 161 186 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 Gene3D Kinesin motor domain 396 665 IPR036961 -
Aed8g1857 1449 Coils Coil 915 953 - -
Aed8g1857 1449 PANTHER MYOSIN 1091 1446 - -
Aed8g1857 1449 PANTHER MYOSIN-9 512 1083 - -
Aed8g1857 1449 PANTHER MYOSIN-9 17 232 - -
Aed8g1857 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 886 IPR027417 -
Aed8g1857 1449 SMART iq_5 785 807 IPR000048 GO:0005515
Aed8g1857 1449 SMART iq_5 737 759 IPR000048 GO:0005515
Aed8g1857 1449 SMART iq_5 808 830 IPR000048 GO:0005515
Aed8g1857 1449 SMART iq_5 760 782 IPR000048 GO:0005515
Aed8g1857 1449 SMART iq_5 856 878 IPR000048 GO:0005515
Aed8g1857 1449 SMART iq_5 833 855 IPR000048 GO:0005515
Aed8g1857 1449 Gene3D Kinesin motor domain 43 235 IPR036961 -
Aed8g1857 1449 Pfam DIL domain 1268 1371 IPR002710 -
Aed8g1857 1449 SMART DIL_2 1267 1374 IPR002710 -
Aed8g1857 1449 ProSiteProfiles IQ motif profile. 761 790 IPR000048 GO:0005515
Aed8g1857 1449 ProSiteProfiles IQ motif profile. 857 886 IPR000048 GO:0005515
Aed8g1857 1449 Coils Coil 880 907 - -
Aed8g1857 1449 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 20 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 Coils Coil 971 1012 - -
Aed8g1857 1449 PANTHER MYOSIN 512 1083 - -
Aed8g1857 1449 PANTHER MYOSIN 17 232 - -
Aed8g1857 1449 SMART MYSc_2a 69 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g1857 1449 CDD MyosinXI_CBD 1092 1415 IPR037975 GO:0007015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1857 Aed-Chr8 23238010 23251880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1857 14 1449 Myosins gene family AT1G54560 66.538 0.0 2019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1857 K10357 - zju:107412172 2014.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0101 4 711042 723249 Aed8g1857 8 23238010 23251880 PCT
Aed2g2580 2 28224297 28235258 Aed8g1857 8 23238010 23251880 PCT