Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1845 ATGCATGACATGCCCTCTCTGCCACAAGTTCTACAAAGATGCCACCACCATCTCTCTCTGCCTCCACACCTGAAGTGCATATATGAGAAGCTCTCGGATGAGGAGATGGATTGCTGTCCTGTGTGCAATATTGATCTAGGCTGCCTTCCGGTGGAGAAACTCAGGCCAGACCATAATTTGCATGATTTAAGGGCAAAAATATTCCCTTTTAAAAGAAGAAAAAAGATCAAGGCCCAAGAAGTTTTGTCTTCAATATCATTGCCTGCAAAAAGGAAGGAAAGATCACTTTCATCATTGGTAGTCAGTGCTCCCAAGGTTTCAATGCAACATGGCTTTACAGGAAAGAGAACAAAAACCAGCACAAGAAAGACCGCTGCTTTACGTGGATGCAGTTTTCTTCTTGACGAATCCATAAAGAAGGAAGAAACAAATGGTGATGATAATATGGTAAGCTCAATTTTACCTGATTCATCAAATATGATTTCTGAAGTTGAAATTCAGGATTCTTCGGTGCCTGAGCCTTCTAAGAAGCATAAGCCCCATGAAGATACAGAGAACAGTGTGGAACATACAGAAGGGAAGGTTGATCTCTGGACACCACTGAACTGTCTTGTTGAAGCTGCCAACAGAACAAAGTCCTCCAGGTCAAATTCACAAGCAACTCCTCTTGCCAAATTAGAGTCCCCAACTACTCCTCACGGTGGACAAGATACATCTGAAACTACAACCAAAACAGACCTACCTGCTTCTGCCCAAGGTGAATTAAGCATTCCAAAATCCAAAAATAAGGATACTGGACATAAAACACTATTTGGAGATGACAAGAATGCAAACAGCTTGCCATCAGGACCAGTGAAGCGAAGAAGGTTGCGTCCTTCTGGTCAGAAAAGAGTTGCAGCATCTGAGATGTCTGCCTCATCCCCAGCCCCACTAGATTCAACAGGGGGCAAGTGCAGCAACAGAAAAACAGAAAGGAGATGTTCCCTTGCCACAGATCTCAGCATGTTATTTAAGAATAAAGTGGAAATAATGTGCCGGGGTCAACCAGTGCTCCCATCTTTACAACTGCATAATTTAGTAGATTTATGGTTCCGGACAGCATCAACCTCAAAAAAGATGCCAGCATCAGTGGGGTCCTCAGCCAAAGATTTTGTAATGGTTTTATCATATTGTCGAAAGGCCTTAGCTCCTTGA 1194 0.4305 MHDMPSLPQVLQRCHHHLSLPPHLKCIYEKLSDEEMDCCPVCNIDLGCLPVEKLRPDHNLHDLRAKIFPFKRRKKIKAQEVLSSISLPAKRKERSLSSLVVSAPKVSMQHGFTGKRTKTSTRKTAALRGCSFLLDESIKKEETNGDDNMVSSILPDSSNMISEVEIQDSSVPEPSKKHKPHEDTENSVEHTEGKVDLWTPLNCLVEAANRTKSSRSNSQATPLAKLESPTTPHGGQDTSETTTKTDLPASAQGELSIPKSKNKDTGHKTLFGDDKNANSLPSGPVKRRRLRPSGQKRVAASEMSASSPAPLDSTGGKCSNRKTERRCSLATDLSMLFKNKVEIMCRGQPVLPSLQLHNLVDLWFRTASTSKKMPASVGSSAKDFVMVLSYCRKALAP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1845 397 MobiDBLite consensus disorder prediction 170 192 - -
Aed8g1845 397 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 25 324 - -
Aed8g1845 397 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 333 396 - -
Aed8g1845 397 MobiDBLite consensus disorder prediction 209 323 - -
Aed8g1845 397 MobiDBLite consensus disorder prediction 209 259 - -
Aed8g1845 397 MobiDBLite consensus disorder prediction 164 194 - -
Aed8g1845 397 MobiDBLite consensus disorder prediction 299 317 - -
Aed8g1845 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 89 IPR013083 -
Aed8g1845 397 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 25 324 IPR044807 GO:0004842
Aed8g1845 397 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 333 396 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1845 Aed-Chr8 23141088 23145908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1845 25 243 C3H Transcription Factor Family AT2G30580 46.610 7.07e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1845 K16277 - gmx:100783999 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0878 8 7522592 7530511 Aed8g1845 8 23141088 23145908 ECH
Aed8g1845 8 23141088 23145908 Aed8g1845 8 23141088 23145908 ECH