Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1839 TATTTTGACCAATATACCCCCGGGGCTCTCGTTTTGTGTAGCTGCGTAGTACGTTGTTGCGTTTCTCCCCAATCCACATCGCATCACACAGAATCAAGCGAAAGGAAACGTACGATACGATACGATATGGATAGGGTGTTTTCAGTGGATGAAATCTCCGATCACTTCTGGCCGTCACCGATCCCCGTCTCCGGCGCCGACTCCTCCTCTCAGATGAGTCGCAGCGCCTCCGAGTGGGCCTTCCAGCGCTTCATCCAGGAAGCTTCCGCCGCCTCCGCCTCCGCGCCATCTCCCCCGTCTTCTTGCTCCGCCGCCGACGTCGTTTTGGTGGAGATCGACGATCAACACAAACCCTCCGCCCCTCCGCCTCCATCTAACGGCGCCGTTTTGACCAATGCCCCTGCTCCCGTGCCTCTCGACTCCGAGGAATACCAGGCCTTCCTTAAGAGCAAGCTCAACCTCGCATGCGCCGCCGTCGCCATGACTAGGGGATCATTGGCTAAATCTCCAGACCCGTCCCCTTTTTCTGATGCTGGATCACTGCCGACTAATCCTTCTCAAGTTGAATCTCAGACTACTTCTAAAGAACCTATTCCTTCTGGAAATGATCCATCTATCTTATTACAAGATAGAGATAATAAAGTACCAGTTGGGATTGCTTCCATACCTGCCACGCAAAAGAAACCTGCTGTTGCAATTAGGCCATCGACAAGTGGATCATCAAGAGAACAGTCAGATGACGATGACATTGAGGGAGAGACATCTATGAATGACAACACGGACCCTGCTGATGTTAAACGAGTAAGGAGGATGCTATCCAATAGGGAGTCAGCCCGACGCTCTAGAAGAAGAAAGCAGGCTCATTTATCTGACCTAGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGTTAAATCGCCTAACTGATGTTAGTCAGAAATACAGTGAATCTGCTGTTGACAACAGAGTTCTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACAGTCAAAAGAATTACTGGGTTGAGCCCAATGATTCATACGATGTCTGATATATCATCACTGGGTATGCCATCATTTGATGGAAGAAGCCCTTCAGACAATTCAGCTGATGCAGCTGTTCCTGTGCAAGATTTCTATCAACCCACATCTAATAATCCTATTCCCAGTCATGATCCGAGAGTCAACAATGGGTTGGGTGGCATTTCTTCAATTGAAAATGTGCAGCAGAACGCCACCACAGCGGCAGTGGGTCAAACAGCAGCATCCTTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGCATTCGTGCTGGTGTGGACTCGTGTGCACCTCCATCTAATGGGGAGCAGTAA 1386 0.4913 YFDQYTPGALVLCSCVVRCCVSPQSTSHHTESSERKRTIRYDMDRVFSVDEISDHFWPSPIPVSGADSSSQMSRSASEWAFQRFIQEASAASASAPSPPSSCSAADVVLVEIDDQHKPSAPPPPSNGAVLTNAPAPVPLDSEEYQAFLKSKLNLACAAVAMTRGSLAKSPDPSPFSDAGSLPTNPSQVESQTTSKEPIPSGNDPSILLQDRDNKVPVGIASIPATQKKPAVAIRPSTSGSSREQSDDDDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLSDLETQVSQLRGENSTLLNRLTDVSQKYSESAVDNRVLKADVETLRAKVKMAEETVKRITGLSPMIHTMSDISSLGMPSFDGRSPSDNSADAAVPVQDFYQPTSNNPIPSHDPRVNNGLGGISSIENVQQNATTAAVGQTAASLQRVASLEHLQKRIRAGVDSCAPPSNGEQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1839 461 Gene3D - 265 322 - -
Aed8g1839 461 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 269 284 IPR004827 GO:0003700|GO:0006355
Aed8g1839 461 Pfam Basic leucine-zipper C terminal 333 450 IPR020983 -
Aed8g1839 461 MobiDBLite consensus disorder prediction 260 275 - -
Aed8g1839 461 MobiDBLite consensus disorder prediction 176 200 - -
Aed8g1839 461 Pfam bZIP transcription factor 265 318 IPR004827 GO:0003700|GO:0006355
Aed8g1839 461 SUPERFAMILY Leucine zipper domain 266 316 IPR046347 GO:0003700|GO:0006355
Aed8g1839 461 SMART brlzneu 262 326 IPR004827 GO:0003700|GO:0006355
Aed8g1839 461 MobiDBLite consensus disorder prediction 115 134 - -
Aed8g1839 461 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 264 319 IPR004827 GO:0003700|GO:0006355
Aed8g1839 461 PANTHER BASIC LEUCINE ZIPPER 63 43 442 - -
Aed8g1839 461 PANTHER BZIP TRANSCRIPTION FACTOR 43 442 - -
Aed8g1839 461 CDD bZIP_plant_GBF1 267 318 IPR045314 GO:0003700|GO:0006355
Aed8g1839 461 Coils Coil 275 309 - -
Aed8g1839 461 Coils Coil 324 344 - -
Aed8g1839 461 MobiDBLite consensus disorder prediction 165 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1839 Aed-Chr8 23104297 23107666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1839 43 436 bZIP Transcription Factor Family AT4G02640 37.089 1.38e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed8g1839 bZIP_C 3.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1839 K25784 - gmx:778135 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1839 8 23104297 23107666 Aed8g1839 8 23104297 23107666 ECH
Aed2g2563 2 28111715 28114651 Aed8g1839 8 23104297 23107666 PCT