Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1833 ATGACATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCAGCGCTTCTTATATGTGTTGAAGAAGATTCGCCTTGCTCGTCAAACTGAGCGCTCTCGTAGATCTGCACACCTGGAGATGGAGCTCATCTCTAAATTTAGAAACCCATTCATTGTGGAGTACAAAGATTCATGGGTAGAAAAGGGTTGTTACGTCTGCATCATTATAGGATATTGTGAGGGAGGAGATATGGCAGAAGCTATAAAGAAAGCTAATGGCATCCTGTTTCCTGAGGAGAAACTTTGTAAGTGGCTCGTTCAACTTCTTATGGCTCTTGAATACCTGCACATGAACCACATTCTTCACCGTGATGTCAAGTGTTCAAATATCTTCTTGACAAAAGATCGTGACATACGTCTCGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTTGCTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGTTGTATATATGAAATGACAGCGCATAAGCCTGCATTCAAAGCATTTGATATACAGGCATTGATTAACAAGATTAATAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTAGTTCATTCCGAGGTCTTGTTAAAAGTATGCTTCGGAAAAATCCAGAGCTAAGGCCCAGTGCTTCAGAGCTGCTTGGGCACCCCCATCTTCAACCTTATGTTCTTAAGGTCCATCTCAAAATCAATAGCCCCAGACGAAGCACATTGCCAGTTCATTGGCCAGAATCCAACTACATGAAGAAAACTAGATTTTTAGTGCCAGAAGATGATCCTGTTTCCATCTATAGGGATAAGCGACATTCTTTCACCAATGATCGGACTCTAAATCCTAGTGTATCTGGAGCTGATCAAGATTCTGTATGTTCTACTCTAGAAATAGATTGTACTCCTGACCATTTGAATCAAAGGTTAGCAGAACTACGTATTGGAGACAGCCATGAAGTGAAGTCAATCCAGAAGCCTGTTGTTTCCAGAACTTCTAGCATTGCTAAGACTCCAAGATTCACTTCCTCAAAAGTCTCAGCCTCCAACAAGAAATCACTTCCATCCTCAAAGAATCACAAGACGCTTCCTCTTTCACAAAACACCACAAAATCTGCTAATACTAATCGCAGAGCATCATTTCCACTGCCAACAAGAGGTGGTATTCGGCAGCCTCCTTGCAGGTCCGTCAGTTTGCTTAGTCATGTGTCTTCACCAAATATCTCAGTCAATTCACCACGAATTGATAAGATGGCTGAATTCCCATTAACTTCATATGAAGATTCTTTGTTTCCTATCAATACATCATCCTGTGCACGAGGTTTCTCAGACTTAACATCTCCTAGCAACCATTCAACTGTGATAGACAAATGCACAGTAGAGGTATATGATAGAGGCTCTAACAAGCCTGATTGTATGGATGCTTGGCAGGGAATCAAGCAGAGCATGTTAAAAGAAATTGATGAGGATAAAAGTGGTTCCTCTGATCAAAATGCAACTGCAGGTGCTTCAAGCCACACCTCTTCTGACTTGCGTCGTCGGCAATTTGACCCATCATCATTCAAACAAAGAGCTGAAGCTTTAGAAGGCTTGCTTGAATTTAGTGCAAGATTGTTACAGCAGGCAAGGTATGATGAACTTGGGGTTCTGTTGAAACCATTTGGGCCTGGAAAGGTTTCCCCAAGGGAAACTGCTATCTGGTTGAGTAAGAGCTTCAAAGAGAACACTTTCAAACCAGAAGAATCCACTTAA 1836 0.4172 MTWSSMKYLSKLEKVLLVQRFLYVLKKIRLARQTERSRRSAHLEMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGILFPEEKLCKWLVQLLMALEYLHMNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSSSFRGLVKSMLRKNPELRPSASELLGHPHLQPYVLKVHLKINSPRRSTLPVHWPESNYMKKTRFLVPEDDPVSIYRDKRHSFTNDRTLNPSVSGADQDSVCSTLEIDCTPDHLNQRLAELRIGDSHEVKSIQKPVVSRTSSIAKTPRFTSSKVSASNKKSLPSSKNHKTLPLSQNTTKSANTNRRASFPLPTRGGIRQPPCRSVSLLSHVSSPNISVNSPRIDKMAEFPLTSYEDSLFPINTSSCARGFSDLTSPSNHSTVIDKCTVEVYDRGSNKPDCMDAWQGIKQSMLKEIDEDKSGSSDQNATAGASSHTSSDLRRRQFDPSSFKQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPGKVSPRETAIWLSKSFKENTFKPEEST 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1833 611 PANTHER SERINE/THREONINE-KINASE NEK4 20 596 - -
Aed8g1833 611 SUPERFAMILY Protein kinase-like (PK-like) 20 297 IPR011009 -
Aed8g1833 611 MobiDBLite consensus disorder prediction 353 409 - -
Aed8g1833 611 Gene3D Phosphorylase Kinase; domain 1 11 76 - -
Aed8g1833 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
Aed8g1833 611 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 20 596 - -
Aed8g1833 611 CDD STKc_Nek 14 251 - -
Aed8g1833 611 Gene3D Transferase(Phosphotransferase) domain 1 77 265 - -
Aed8g1833 611 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1833 611 MobiDBLite consensus disorder prediction 522 537 - -
Aed8g1833 611 MobiDBLite consensus disorder prediction 515 544 - -
Aed8g1833 611 Pfam Protein kinase domain 22 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1833 611 MobiDBLite consensus disorder prediction 352 416 - -
Aed8g1833 611 SMART serkin_6 6 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1833 Aed-Chr8 23061786 23070013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1833 2 252 MAP Kinase Kinase Kinase AT1G53570 30.534 3.99e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Aed8g1833 Pkinase 4.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1833 K08857 - gmx:100804898 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1833 8 23061786 23070013 Aed8g1833 8 23061786 23070013 ECH
Aed2g2551 2 28059439 28064880 Aed8g1833 8 23061786 23070013 PCT