Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1832 ATGTTCGATGGAGTACCAGATCAGTTTCACCACTTCATAACTCCAAGGACCTCACTACCTCTTCACTTACCCTTCCCTCTCCATGCTTCAGGCACCTTCCCCACCAATTTTGATCCCTATAATCATCATCAATTGCCACTGCAACTGCAACCACCCAACAATAATCTCATCAGCTTGCACCCATTACACCACCACAAAGATGAAGAGAAGGAAGAAAACAGTAACCCAATGAACAACTTCGAAATCCAAAGAGATCAAAGCCAACAACTTCCTCAGCTTATTGATCCTGATCCCTGGACCAACGATGAACTCCTCTCACTCTTGAAGATCAGATCTAGCATGGAAACTTGGTTCCCAGAACTCACTTGGGAACATGTCTCTAGGAGGCTAGCAGAGCTTGGATATACTAAGAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAACTAGATATTTCAACAACAACACCAACACTAGTAATAATAATAGCAATTACAGGTTTCTGAGTGAGCTTGAACAGCTTTATAATCAGCAACAAGGGGGTGGTGATCATCTTGATCAAAAGACGACGTCACAGCCACTACTGCAGAAACAAGACAAGACCATGGCGGATTCGAGAAACAACAACATTGACGGCACCGCAGCAGCATCGGTGATGACAACCACAAAACAAAACGATGAGCAAAGCGTGGAAAAGACTACAAAGGTTATTGAGGGGTGCAAGAGGAAGAGGCCTGCAGATCATAGGTTTGAGGTGTTCAAGGGTTTCTGTGAGAGCATTGTGCACAAGATGATAGCGCAGCAAGAAGAGTTGCACAACAAGCTCCTGGAGGACATGGTGAAAAGAGATGAAGAGAGGATTATTAGAGATGAAGCTTGGAAGAAGAAGGAGATGGAGAACATGAACAAGGAGCTTGAGATGATGACACGTGAGCAAGCTATTGCAGCTGATAGACAAGCCAACATTATCCAATTCTTGAAAACTTTCTCGCCCCCTGGAGGCAAGGTAACAAACCTAAACACCCACATTGTTACACAAAACCCTAATAATCCTTCACAAACCGCAGCACACCGAAACCCTACATTACAACTCATTATTCCTTCTACTTCTTCTACCCAGAACCCTAGTTCTTGTTCTCTAAATAGCTACAATAATAATAATAATCCAGTGGAGACAAATTTGGTTTTGAATAGAGCGTTGTCATCAAACGTTGTGTCCAAAAAGGAGAAAGACAGCGATGTTGGGAGAAGGTGGCCAAAGGATGAAGTGTTGGCCCTGATAAACCTGAGGTGCACTACTACTGTGAACAACAACAATGAGGAGAATAAGGTAGGGAACATAAACAAGGTTCCTCTATGGGAGAGAATCTCACAAGGGATGTCGGAGTTGGGATACAAGAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGGAAAACCAAGGATGTTAATAAGAAGAGGTCCCTTGACTCAAGGACATGTCCCTACTTTCACCAACTCAGCAGTCTATATAATCAAGGAAAACTTGTTCTACAATCTGATCAGAGCCACTTCAATAATCCTAATCCACCTGATGAGAATGAGAATCTCGACCAAGTGATGACGACACCAGATCAAACAACACAAGCTCATGAGTCTTCTTCTCAGGTGGGGTCTGCTGGTTTCAGTGTGCAGCAGGTTGATGATCATGGAGGTGAGAAAACCTTGATGCAAGTACCTTCTTTGGATTTTGATCAGTTTTAA 1767 0.4329 MFDGVPDQFHHFITPRTSLPLHLPFPLHASGTFPTNFDPYNHHQLPLQLQPPNNNLISLHPLHHHKDEEKEENSNPMNNFEIQRDQSQQLPQLIDPDPWTNDELLSLLKIRSSMETWFPELTWEHVSRRLAELGYTKRSAEKCKEKFEEETRYFNNNTNTSNNNSNYRFLSELEQLYNQQQGGGDHLDQKTTSQPLLQKQDKTMADSRNNNIDGTAAASVMTTTKQNDEQSVEKTTKVIEGCKRKRPADHRFEVFKGFCESIVHKMIAQQEELHNKLLEDMVKRDEERIIRDEAWKKKEMENMNKELEMMTREQAIAADRQANIIQFLKTFSPPGGKVTNLNTHIVTQNPNNPSQTAAHRNPTLQLIIPSTSSTQNPSSCSLNSYNNNNNPVETNLVLNRALSSNVVSKKEKDSDVGRRWPKDEVLALINLRCTTTVNNNNEENKVGNINKVPLWERISQGMSELGYKRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSSLYNQGKLVLQSDQSHFNNPNPPDENENLDQVMTTPDQTTQAHESSSQVGSAGFSVQQVDDHGGEKTLMQVPSLDFDQF 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1832 588 ProSiteProfiles Myb-like domain profile. 419 482 IPR001005 -
Aed8g1832 588 CDD GT1 418 489 - -
Aed8g1832 588 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 578 - -
Aed8g1832 588 SMART sant 416 484 IPR001005 -
Aed8g1832 588 SMART sant 95 153 IPR001005 -
Aed8g1832 588 MobiDBLite consensus disorder prediction 522 564 - -
Aed8g1832 588 Pfam Myb/SANT-like DNA-binding domain 97 176 IPR044822 -
Aed8g1832 588 Pfam Myb/SANT-like DNA-binding domain 418 510 IPR044822 -
Aed8g1832 588 ProSiteProfiles Myb-like domain profile. 98 151 IPR001005 -
Aed8g1832 588 Gene3D - 420 487 - -
Aed8g1832 588 Gene3D - 99 156 - -
Aed8g1832 588 MobiDBLite consensus disorder prediction 179 211 - -
Aed8g1832 588 PANTHER - 13 578 - -
Aed8g1832 588 Coils Coil 300 320 - -
Aed8g1832 588 MobiDBLite consensus disorder prediction 522 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1832 Aed-Chr8 23047706 23050651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1832 1 514 Trihelix Transcription Factor Family AT5G28300 39.420 1.87e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed8g1832 Myb_DNA-bind_4 2.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1832 - - gmx:100804367 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1832 8 23047706 23050651 Aed8g1832 8 23047706 23050651 ECH
Aed2g2550 2 28052149 28055349 Aed8g1832 8 23047706 23050651 PCT