Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1824 ATGATGAATGGGGTCACACACCTTGAACCAGATGACTCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATATGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTCGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGTTGTATGATTTCCTGCAAAGCCCTGAAGATCTTGAGAGGCTTTACTGTGAAATCCATCTCCTGAAAACATTGAAGCACAGAAACATTATGAAGTTCTACACTTCTTGGGTCGACACTGCCAATAGGAATATCAACTTCGTGACTGAAATGTTCACATCTGGTACACTTAGGCAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTATACAGATCTTGAACGGACTTCTCTATCTTCATAGTCACGACCCGCCTGTGATCCATAGAGATCTAAAATGTGATAATATTTTTATCAATGGAAACCAAGGGGAAGTAAAGATTGGAGATCTTGGTTTGGCAGCAATTCTCAGGAAATCTCATGCTGCTCATTGTGTAGGGACACCCGAGTTCATGGCCCCAGAAGTATATGAAGAGGCATATAATGAGTTAGTGGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTAACATTTGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTACAAAAAAGTCATTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCGGAAGTGCGACAATTTGTCGAGAAATGCTTGGCCACAGTGTCTCTAAGGCTTTCTGCAAGGGAGCTTCTAGGTGATCCATTTCTTCAAATTGATGATTATGACTATGATTTGAGGAATGTAGACAACGGGGAAATAGATGAATTTGGTCCTCTCATGAGACAGCCATTCTTTGATCTTCATCGAAGCTATAGTAACTTCAGCAATGAATACTCAAATGGCTTTGGATATGAAGGAGACTGGTGTCCTCACCCGTCTGAGATTGAACCTAGTGGAATTGAACTTTTTGAGTACCATGATGAGGATGATGAACCCTCCGAAGATGTTGACATAAGCATCAAGGGCAAGAGGAAAGATGATGGTGGTATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTGGACATGACTGATCAGGATGTTACAAGAATAGCAGATATGATAGATGGGGAAATTGCCTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATTGTTGAGACTCCTCGTTTTGCTGCTAACAATCAAGGTTTCTGTCACAATTGTGTGTCTAATCATACTTCTAGCGGTTCTATTCTGGATTTTCTTTCAAACAATCCAGGTAACAAGAACTTGCAACTTCTTGAGTGTTGTAGGCATGGATGTGCTTCAATGCATGGCCGGTTTGGGGAGATTACCACCTTCCAATCTGAGGACTATGACAATCATGCTAGAGGGGATCTGAACATGCCAAGCCAATTAGACAGCTTGCAGTATCATCAGGAGTTATGGAATCAGCATGAAAGCCGCGAACTGAGTCCGGTAGAGTCTGATCAAAGCCATTCCGATGAACAATATGAACATTTAGATAAATCAATACCAGCAGCTAAGGACAATGCAGCAAATTCTCTGATAAACTTATCAGGAAGTCATCATGATTTCTCTACTATCCGATCGAGCTATGGTGACCTTGATGATGACTACGAGAAAGAGATCCAAAAGGAACTCAGATGGCTCAGAGCAAAGTACCAAATGGAGTTAAGGGATCATAAGGATAGACAGTTTGGGCAATGTTCACATAGCAGTAACAATGAGCACATGACAGAAAATGGCCTTTTGTCACCTTCACTGACAGAAACATTAAAAGGAGGCAACAATACTAATAAGTGGCATTGTGATTCCAGCCCCAATTCGGACACCCAAAGGGCCCAAAATTGTGAGGCGAATGAATCCCCTGAAGAAGGTATGGTTACTACTGCAAAGAGTTTTTACACAGGCTCATTGCTTCCACACTCTTTGCACAGGACAGTTTCTCTGCCAGTTGATGCTGTTGATATTTAA 2160 0.4157 MMNGVTHLEPDDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCIQILNGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLGDPFLQIDDYDYDLRNVDNGEIDEFGPLMRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPSEIEPSGIELFEYHDEDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDMTDQDVTRIADMIDGEIASLVPEWRPGPGIVETPRFAANNQGFCHNCVSNHTSSGSILDFLSNNPGNKNLQLLECCRHGCASMHGRFGEITTFQSEDYDNHARGDLNMPSQLDSLQYHQELWNQHESRELSPVESDQSHSDEQYEHLDKSIPAAKDNAANSLINLSGSHHDFSTIRSSYGDLDDDYEKEIQKELRWLRAKYQMELRDHKDRQFGQCSHSSNNEHMTENGLLSPSLTETLKGGNNTNKWHCDSSPNSDTQRAQNCEANESPEEGMVTTAKSFYTGSLLPHSLHRTVSLPVDAVDI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1824 719 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 707 - -
Aed8g1824 719 MobiDBLite consensus disorder prediction 541 560 - -
Aed8g1824 719 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
Aed8g1824 719 MobiDBLite consensus disorder prediction 630 688 - -
Aed8g1824 719 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1824 719 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 2 707 - -
Aed8g1824 719 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1824 719 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1824 719 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Aed8g1824 719 CDD STKc_WNK 23 282 - -
Aed8g1824 719 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Aed8g1824 719 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 430 IPR024678 GO:0004674|GO:0005524
Aed8g1824 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Aed8g1824 719 MobiDBLite consensus disorder prediction 627 688 - -
Aed8g1824 719 Gene3D - 374 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1824 Aed-Chr8 22975814 22980297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1824 2 505 MAP Kinase Kinase Kinase AT3G22420 59.484 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed8g1824 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1824 K08867 - gmx:100272198 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1824 8 22975814 22980297 Aed8g1824 8 22975814 22980297 ECH
Aed2g2544 2 28011681 28015922 Aed8g1824 8 22975814 22980297 PCT