Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1819 ATGTTGTCGTCCCTATCTTCATCTTCCTCTTCCGAAGAAGAAGAAGAAGAAGAAGAAGAATTCCTTGACATCAACCATGAAAACGAACAAAAGTTCAATGTAGAAGATGACGAGAACGACCATTTTCTTAACTCGTGCGATGTTGATGACACCATTCCCGTTGCACTTGCCGTTCCCAATGCCTCCCCTGCTGTCACAGTGGCCTTCCCGGCCGCTGCCATTGCTAGCACTGTAGTAACACGCTTGAAAGGGCAACAGCGTGGCTCCAAGTATTCCGGCATGGTGAGACAATATCAGAGGCTGTGGACGAAGGAGGATGAGATGGAACTGTTGAAGGGATACCTTGATTACATCAAGCACCATAGAAGGGAAGCCGCCGCCGCCGCCGCCACCACCCTCCAAAACGACGTAGCCTCGTTGTATGATCACGTGAGGCCCAAACTGAACGTGGGTTTCAACCAGAACCATCTTGTTGAGAAGCTGCGTAGGTTAAAGAGAAAACACAAGTTGGCTTTGGACAAAGGCAGGGACAGGGATGTTCCCTTTAGGAACCCCCGAGAGCAGGCCATTTTCGAAATTTCCCACAAGATTTGGGGCAATGACACCGATAATAATAACATAATAGACCAAGATGTCATGGTTGGCAATGAATCAGGACACACTCCTGAAAGTCGTTATCATGTTGGCAATGTTAAGGTGAAGAATGAAAGAGTTGACAAAAGTGATGAAACAGACAATAGAGTGCCAAAGCGGTTGCGGCTAGATGATGATGCGAACAGAACAAATGACCAGAACAGCGGTGATGGCATACGAGGCTTCATTGAGGAGACCATGAGGTCCTGTTTCTCACCATTTCTCAAGGAAGTGTTGTTGGATGAAGCACAGGAAGAGCCACTTCCTGAGTTGGTGCCAATCCCAATGTTGCTATGCCCTGAGGAAGTGGACCATGAACAATGGAGAAAACGGAAGATTTTGGAGTTGGAGGTGTATGTGAAGCGGTTGGAACTGTTGCAGGACCAGATCAAGGCTAGATTGGACGAGTTGCGAACTAGCTGA 1056 0.4782 MLSSLSSSSSSEEEEEEEEEFLDINHENEQKFNVEDDENDHFLNSCDVDDTIPVALAVPNASPAVTVAFPAAAIASTVVTRLKGQQRGSKYSGMVRQYQRLWTKEDEMELLKGYLDYIKHHRREAAAAAATTLQNDVASLYDHVRPKLNVGFNQNHLVEKLRRLKRKHKLALDKGRDRDVPFRNPREQAIFEISHKIWGNDTDNNNIIDQDVMVGNESGHTPESRYHVGNVKVKNERVDKSDETDNRVPKRLRLDDDANRTNDQNSGDGIRGFIEETMRSCFSPFLKEVLLDEAQEEPLPELVPIPMLLCPEEVDHEQWRKRKILELEVYVKRLELLQDQIKARLDELRTS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1819 351 Coils Coil 331 351 - -
Aed8g1819 351 MobiDBLite consensus disorder prediction 237 270 - -
Aed8g1819 351 Pfam Protein of unknown function, DUF573 99 199 IPR007592 GO:0006355
Aed8g1819 351 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 2 351 - -
Aed8g1819 351 PANTHER BNAANNG10740D PROTEIN-RELATED 2 351 IPR007592 GO:0006355
Aed8g1819 351 MobiDBLite consensus disorder prediction 237 262 - -
Aed8g1819 351 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1819 Aed-Chr8 22944313 22945368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1819 52 350 GeBP Transcription Factor Family AT5G28040 32.687 1.09e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Aed8g1819 DUF573 1.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1819 - - gmx:102662842 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2541 2 27996908 27998098 Aed8g1819 8 22944313 22945368 PCT