Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1818 ATGGCATCCGATCTAAACGACGCCGTTTACCCCGAAGAAGATCTCGACGACGACGACGAAACTCCAGAGGACGAAGAGGACGACGACGACGTTCTAGACGACGATGTCCTAGACGACGACGAAACCGAGCCCTCTCCTTCCGTCCTCGCCGTCGCTCCGCTCGCCTCCGCCGTCTCCGAAACCGCGTCGATTCCGATCGTCGCCGTGGCGGCGGATTCGTCGCCGAAACCGCCGCGCACGGAGCAAATCGAGGAGAAGAAAGCGCTGGACGATTCGCGGCGACTGTTCCAGCGTCTGTGGACGGACGAGGACGAGATCGGGCTCCTGCAGGGGTTTCTGGAGTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACGGCTCTGTTCTACGACCAAATCAAATCGAAGCTCCAGCTCGGATTCAACAAGAGCCAGCTCGTGGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCGTCAGCAAAATCAGCTCCGGCAAGGAAGTCTCCTTCAAGAGCCCTCACGACAGAGCCACCTTCGAAATCTCCAGCAGGATCTGGAGCAGCACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCAACCTCAACCCTAACCCTAATCCTAACTCTAATTTCGGCAATTCGACGAAAACACCGCTTTCGAGAAAGCGGTCGCGGCCTCGATCGGAGAAGCGAGAGTTGAACGACGGCGGTTCAACGTTGAATAGAGATAATAATAATAATAATTGTATTGGCAATAACAATAGCCATAGTAATAATAGTAATGAGAATTGTAATAGCAAGCATAACTTACAGGGTTTGATTGAAGAAACAGTGAAGAGTTGCGTGTCGCCGGTGTTGAAGGAGTTGGTATGTGGTGCTAATGGTGGCATGGGATTGGGAAGAGGCTTCGCCTTGAATCCCTTGCAAATGCCGTTGAGTTTGTTGAATTTGGGGATTGGAGAAACGGCGATGGATGAGAAGTGGAAGAAGCAACAGATTCTGGAGCTGGAAGTGTATTCGAAGCGATTGGAATTGGTGCAGAATGAGATCAAGGTTGCTATAGAGGAGTTGCGATCAGCTGGAGGAGTATGA 1110 0.5261 MASDLNDAVYPEEDLDDDDETPEDEEDDDDVLDDDVLDDDETEPSPSVLAVAPLASAVSETASIPIVAVAADSSPKPPRTEQIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKSQLVEKLRRLKKKYRNVVSKISSGKEVSFKSPHDRATFEISSRIWSSTAPITGPVEDDDEINLNPNPNPNSNFGNSTKTPLSRKRSRPRSEKRELNDGGSTLNRDNNNNNCIGNNNSHSNNSNENCNSKHNLQGLIEETVKSCVSPVLKELVCGANGGMGLGRGFALNPLQMPLSLLNLGIGETAMDEKWKKQQILELEVYSKRLELVQNEIKVAIEELRSAGGV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1818 369 Coils Coil 144 164 - -
Aed8g1818 369 MobiDBLite consensus disorder prediction 244 269 - -
Aed8g1818 369 MobiDBLite consensus disorder prediction 193 269 - -
Aed8g1818 369 MobiDBLite consensus disorder prediction 207 225 - -
Aed8g1818 369 Pfam Protein of unknown function, DUF573 96 190 IPR007592 GO:0006355
Aed8g1818 369 Coils Coil 335 362 - -
Aed8g1818 369 PANTHER BNAANNG10740D PROTEIN 1 367 - -
Aed8g1818 369 PANTHER BNAANNG10740D PROTEIN-RELATED 1 367 IPR007592 GO:0006355
Aed8g1818 369 MobiDBLite consensus disorder prediction 9 42 - -
Aed8g1818 369 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1818 Aed-Chr8 22940302 22941411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1818 12 365 GeBP Transcription Factor Family AT5G28040 46.231 2.54e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Aed8g1818 DUF573 9.2e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1818 - - gmx:100817182 456.832