Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1805 ATGGGGTGTGTGATTAGCAGAGAAGTGTCATCGGGAATAGTCTCCGAGGTGAAGGAGGAGAAAAATTTGAGTGCTGAGTCCAACAAGAAAGTTGATCAAGAAGTGTCCACAGGCAGAGCTGAGGAGAACGTGGTAGAGGCTCGAAATGGTGAGAAGGAGAAGGAAGAGAATGGTGGTGCTGATGGGGTTCGGCGGCCCCCGAAGGGTGATAGAAGAAGATCAAAGCCAAATCCAAGGCTAAGTAATCCACCAAATCATTTGCAGGGGGAGCAAGTAGCAGCTGGCTGGCCGCCTTGGCTGACAGCAGTGTGTGGGGAAGCACTTAATGGGTTGATTCCACGAAAGGCTGACACATTTGAGAAAATTGATAAGATTGGTCAAGGAACTTATAGTAATGTATACAAAGCTAAAGACACGCTGACGGGTAAGATTGTTGCACTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTTAAATTCATGGCCAGAGAGATTCTTATTTTGCGAAGGTTGGATCATCCCAATGTCATAAAACTAGAAGGTTTGGTTACATCCAGAATGTCATTGAGTTTGTACCTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGCTGCAAGCCCTGACATCAAGTTTACAGAGCCTCAGGTTAAATGTTACATGCATCAACTGCTATCAGGACTTGAGCACTGTCATAGTCGAAACGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAAATTGCTGACTTCGGACTTGCATCTTTCTTTGATCCAAATCGCAGGCAACCCATGACTAATCGTGTGGTTACCCTTTGGTACCGCCCTCTGGAGTTGCTTCTCGGTGCCACAGAATATGGTGCAGCCATTGACCTTTGGAGTGTTGGTTGCATTTTAGGAGAGTTATTGGCCGGGAAACCTATTTTGCCTGGTCGTACAGAGGTCGAACAACTGCATAAGATATACAAACTTTGTGGTTCACCATCTGATGAGTATTGGAAGAAGTCAAAGATGCCTAATGCTACCTTGTTTAAACCTCGAGAACCATACAAGAGATGCATAAGAGAGACTTTTAAAGATTTTCCACCTTCGGCACTGCCCCTTATTGACACTCTTCTTGCAATTGATCCAGAAGAACGTAACAGTGCCTCAGATGCTCTAAGTAGTGAGTTCTTTACCACAGAACCATATGCTTGTGATCCTTCTAGTCTTCCAAAATATCCCCCAACCAAGGAAATGGATGCTAAACGACGGGATGATGAAGCAAGGAGATCAAGAGCTGCTGGCAAAGCTCATGGTGATGGTGCAAAGAAGCATCGTACGCGTGATCGTGGTGTAAAAGCTGCTCCTGCTCCTGATGCCAATGCTGAGCTTCAATCCAACATTGATAGAAGGCGTTTGATCACCCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCACCACATGAAGATGGACAGCTTGGCTTTCCTTTAGGATCTTCTAATCATATTGATCCAGATAATGTTCCTTCTGATGTTTCTTTGGGTTCAACCTCATACACCTTTTCAAAGGAACCATTCCAAGCTTGGTCAGGTCCCATTGGTAATTCTGCTAGCATTAGTGTCACAAAGAGGAAGAAACACACTGCAAATGATGCATTGGATTTATCAAAACCATATAAAGGTTCCCACAAGGATAAGGTTAAAGGAAAGAAAACCATAGCTTAG 1746 0.4376 MGCVISREVSSGIVSEVKEEKNLSAESNKKVDQEVSTGRAEENVVEARNGEKEKEENGGADGVRRPPKGDRRRSKPNPRLSNPPNHLQGEQVAAGWPPWLTAVCGEALNGLIPRKADTFEKIDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSLSLYLVFDYMVHDLAGLAASPDIKFTEPQVKCYMHQLLSGLEHCHSRNVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNRRQPMTNRVVTLWYRPLELLLGATEYGAAIDLWSVGCILGELLAGKPILPGRTEVEQLHKIYKLCGSPSDEYWKKSKMPNATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPEERNSASDALSSEFFTTEPYACDPSSLPKYPPTKEMDAKRRDDEARRSRAAGKAHGDGAKKHRTRDRGVKAAPAPDANAELQSNIDRRRLITHANAKSKSEKFPPPHEDGQLGFPLGSSNHIDPDNVPSDVSLGSTSYTFSKEPFQAWSGPIGNSASISVTKRKKHTANDALDLSKPYKGSHKDKVKGKKTIA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1805 581 Gene3D Transferase(Phosphotransferase) domain 1 202 442 - -
Aed8g1805 581 PANTHER CELL DIVISION PROTEIN KINASE 44 558 - -
Aed8g1805 581 Gene3D Phosphorylase Kinase; domain 1 108 201 - -
Aed8g1805 581 MobiDBLite consensus disorder prediction 18 91 - -
Aed8g1805 581 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Aed8g1805 581 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1805 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Aed8g1805 581 PANTHER OS01G0367700 PROTEIN 44 558 - -
Aed8g1805 581 MobiDBLite consensus disorder prediction 531 581 - -
Aed8g1805 581 SUPERFAMILY Protein kinase-like (PK-like) 114 410 IPR011009 -
Aed8g1805 581 MobiDBLite consensus disorder prediction 18 77 - -
Aed8g1805 581 MobiDBLite consensus disorder prediction 551 569 - -
Aed8g1805 581 MobiDBLite consensus disorder prediction 410 518 - -
Aed8g1805 581 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1805 581 MobiDBLite consensus disorder prediction 531 550 - -
Aed8g1805 581 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g1805 581 CDD STKc_CDK9_like 119 403 - -
Aed8g1805 581 MobiDBLite consensus disorder prediction 470 494 - -
Aed8g1805 581 MobiDBLite consensus disorder prediction 421 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1805 Aed-Chr8 22828041 22835684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1805 114 441 Core Cell Cycle Gene Families AT5G10270 53.779 3.06e-121 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Aed8g1805 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1805 K08819 - gmx:100817289 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2524 2 27876876 27882458 Aed8g1805 8 22828041 22835684 ECH
Aed8g1805 8 22828041 22835684 Aed8g1805 8 22828041 22835684 ECH
Aed2g2524 2 27876876 27882458 Aed8g1805 8 22828041 22835684 PCT