Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1804 ATGGTTTTCGATATCAGTTATGCTGTTTCAAAATTGCAAATGTTAACCACCTCAGACCATGCCTCCGTGGTCTCCATGAACTTATTTGTGGCACTTCTTTGTGGTTGTATTGTCCTTGGCCATCTTCTTGAGGAGAATCGATGGATGAACGAGTCTATCACTGCCCTTTTGATTGGTGTTTGCACTGGCGTAGTCATTTTGCTGTTTAGTGGTGGCAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATTTGTTCTTTATATACCTTCTGCCGCCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAATTTTTTGTTAACTTCATGACCATCATGTTGTTTGGTGCCATTGGTACATTAATATCTTGTACCATCATAACTTTGGGTGCCACACAAATTTTTAAGAGGATGGATGTTGGTCCTCTGGAATTAGGGGATTACCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTTTGCACATTGCAGATCCTAAATCAGGATGAGACACCTTTGCTATACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAATCAAATCGACTCTACAATTGCTGTGCACTTTTTGGGCAATTTCTTGTATCTATTTATTGCAAGCACAATGCTTGGAGTGTTGACAGGTCTACTTAGTGCTTATGTTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTGATGATGTTAATGGCATACCTCTCCTACATGCTTGCTGAATTATTTTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACCTGGCATAACGTGACTGACAGTTCAAGAGTCACTACCAAGCATGCTTTTGCAACTTTGTCATTTGTTGCAGAGATTTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTCGTCAGTGATAGCCCTGGAACATCTGTAGCAACTAGTTCAGTATTGTTGGGTCTAATTCTTCTTGGAAGAGCAGCTTTTGTTTTCCCCTTATCCTTTATATCCAACTTGGCCAAAAAATCACAAAATGAGAAAATCAGCTTCAGACAACAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGCGCTGTTTCAATTGCACTTGCATATAATCAGTTCACCATGTCGGGGCACACTTCACTTCGAAGCCACGCGATCATGATCACAAGCACCATCACTGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAGCCACTTATAAGGCTTTTACTGCCCCATACTCAAAGTCCTAAAGAATTAAGCAACACGACAACCACAGATCCATCTTCTCCAAGTCCAAAATCAATCACAGTCCCACTTCTTGGGAGTGCCCAAGAATCTGAAGTAGATATTGTTATTCATCGTCCAAGCAGCATTCGTGCATTGCTCTCCACTCCAACACACACCGTTCATCGTTTGTGGCGTAAGTTTGATGATGCATTCATGCGTCCTGTTTTTGGCGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCGCCATCTGAACGCAATGGCCATCAATGGCATTGA 1632 0.4154 MVFDISYAVSKLQMLTTSDHASVVSMNLFVALLCGCIVLGHLLEENRWMNESITALLIGVCTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLISCTIITLGATQIFKRMDVGPLELGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDSTIAVHFLGNFLYLFIASTMLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTDSSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSVATSSVLLGLILLGRAAFVFPLSFISNLAKKSQNEKISFRQQVIIWWAGLMRGAVSIALAYNQFTMSGHTSLRSHAIMITSTITVVLFSTVVFGLMTKPLIRLLLPHTQSPKELSNTTTTDPSSPSPKSITVPLLGSAQESEVDIVIHRPSSIRALLSTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPSERNGHQWH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1804 543 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 542 - -
Aed8g1804 543 MobiDBLite consensus disorder prediction 452 473 - -
Aed8g1804 543 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed8g1804 543 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 450 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aed8g1804 543 Gene3D - 146 197 - -
Aed8g1804 543 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aed8g1804 543 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aed8g1804 543 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aed8g1804 543 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aed8g1804 543 PANTHER SODIUM/HYDROGEN EXCHANGER 7 542 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1804 Aed-Chr8 22814754 22821652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1804 10 541 Antiporters AT3G05030 76.536 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1804 - - gmx:100816746 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1804 8 22814754 22821652 Aed8g1804 8 22814754 22821652 ECH
Aed2g2521 2 27847592 27850578 Aed8g1804 8 22814754 22821652 PCT