Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1800 ATGGAGTGCAACAAGAACGAGGCTGTAAGGGCTAGGCAAGTTGCCGAAGCTAGAATGCAAAGAGGTGAATTTGTTGAGGCACTCAAGTTTGCTACCAAAGCCAAAAACTTGTATGCTGAAGTTGAAAACATTACCCATGTTCTCACAATTTGCGAGGTTCACAATGCTGCACAGAAAAAACTCTCTGCCTCTGATTTGAACTGGTATGCAATTCTTAAGATTGAAGGGTTGGCTGATGAATCAGCCATAAAGAAACAGTACAAGAGGCTTGCACTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGGTTGGGCAAGCCAATGGGATCTTGAGTGACCAAGCAAAACGTTCTTTGTTTGACAAGAAGTTCGGAGCCGCCACCGTGAGAGGTGGCATTGCACCAAAATCCACCGCTACAAAGAAGCAAGTTAGGCAGAAGACATTCTGGACATGCTGCCAACACTGTAATGCTAAGTTCCAGTTCTGCATACCATTTTTAAATGCAACCTTGCGCTGTGAAAAGTGTTTGAAGTCCTTTAAAGCTTGTGCTATTCCTTCGGTAAATGATCAGAAAGAGTCTCCAATGCATTGTCCCCCAAAACCAGCCACAGAAAAAACTGGTGGTGGAGAACATGCTGGCACATTTGCAAAGTCAAATCCTGTGCCTGTGAAAAAAGGAGCTGCTGGAGTTGGTGCTAATAGTAATCGTGAAGGTGGAAAGAGTAAAGATGGCTATGTTCCTGCATCCAGAGGCATGGAGTCACAAACCTCTAAGAATGTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCAGACTCAGGAGAAAGTTTCAAAACTGGTAATGGTGATGAGATGGAAGATGCTAATGTTGGAGGAAATCATCATGTCGATCCTTCAAGGGTTAATGCAATGAGATCTTCCAGCAAAAAGCAACATGTTTCAAATTAA 969 0.4334 MECNKNEAVRARQVAEARMQRGEFVEALKFATKAKNLYAEVENITHVLTICEVHNAAQKKLSASDLNWYAILKIEGLADESAIKKQYKRLALLLHPDKNKFAGAEAAFKLVGQANGILSDQAKRSLFDKKFGAATVRGGIAPKSTATKKQVRQKTFWTCCQHCNAKFQFCIPFLNATLRCEKCLKSFKACAIPSVNDQKESPMHCPPKPATEKTGGGEHAGTFAKSNPVPVKKGAAGVGANSNREGGKSKDGYVPASRGMESQTSKNVGSKRVRQSAPDSGESFKTGNGDEMEDANVGGNHHVDPSRVNAMRSSSKKQHVSN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1800 322 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Aed8g1800 322 PANTHER - 1 321 - -
Aed8g1800 322 SMART dnaj_3 66 123 IPR001623 -
Aed8g1800 322 Gene3D DnaJ domain 52 153 IPR036869 -
Aed8g1800 322 MobiDBLite consensus disorder prediction 307 322 - -
Aed8g1800 322 MobiDBLite consensus disorder prediction 258 283 - -
Aed8g1800 322 PRINTS DnaJ domain signature 87 102 IPR001623 -
Aed8g1800 322 PRINTS DnaJ domain signature 69 87 IPR001623 -
Aed8g1800 322 PRINTS DnaJ domain signature 103 123 IPR001623 -
Aed8g1800 322 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
Aed8g1800 322 MobiDBLite consensus disorder prediction 197 322 - -
Aed8g1800 322 CDD DnaJ 67 120 IPR001623 -
Aed8g1800 322 Pfam DnaJ domain 67 128 IPR001623 -
Aed8g1800 322 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1800 Aed-Chr8 22784590 22785558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1800 4 195 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.663 1.86e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1800 - - gsj:114370736 474.937