Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1784 ATGTGTTTGCCCGAGGGAGAGAGAGATAGAGAGAGAGCCATGGCACTTGAAGCAGTGGTCTTTCCACAATCACAAGACCACCCCTTTTCAGTGAAGGACTGTTTCTACAACTGCACCTTGTTGTCTTCTTCTTCCATCAACAACATCAACAAAGAAGAACATGAACAAGGTGGTGGTGGTGGTGCTTCTATCTCTACTTTTCTCGATAACAATAATCATCATCAACCAGAGAGTAATAGTTATTACCCTCATGGAGATTGGACTAGCTCTTCTTCTTCATCTATGTTACCCCACTTGAATGAAGTACTTCAAGAAACTACTACTACTACTACTACTACTACTCAAACCTTAGATAATAGCTCAACAACCACTCGTCCCAAGAGGCGCAGAGCCAAAAGCAGAAAGAACAAGGAAGAGATTGAGAACCAAAGAATGACTCACATTGCTGTGGAGCGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGGTGATCAAGCTTCTATAATTGGAGGTGCTGTTAACTTTGTCAAGGAGCTTGAGCAGAGGCTGCATTTTCTTGGTGCTCAGAAAGAAGGAGAAGGCAAATCTGAACCCTTTTCTGAGTTCTTCACTTTTCCGCAGTATTCAACAAGTGGCGGTGGTGGCTCTGATAATTCTAATTCTGCAGCAGCAATAGGTGAGGAAGTGAATGAGGTTAAGTGTGGCATTGCTGACATAGAAGTGACAATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCGCCCCAAGCAGCTATTGAAATTGGTTTCTGGTTTGCATAACATGCGCCTCACAATCTTGCATTTAAATGTTACCACCACTGGTGAAGTTGTTCTCTACTCCCTCAGTGTTAAGGTAGAAGATGATTGCAAGTTGGGATCAGTTGATGACATAGCTGCAGCTGTGTACCAGATGCTAGGTAGGATTCAGGAAGAGGCCTTAATGTTGAATTAA 984 0.4258 MCLPEGERDRERAMALEAVVFPQSQDHPFSVKDCFYNCTLLSSSSINNINKEEHEQGGGGGASISTFLDNNNHHQPESNSYYPHGDWTSSSSSSMLPHLNEVLQETTTTTTTTTQTLDNSSTTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSGDQASIIGGAVNFVKELEQRLHFLGAQKEGEGKSEPFSEFFTFPQYSTSGGGGSDNSNSAAAIGEEVNEVKCGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHNMRLTILHLNVTTTGEVVLYSLSVKVEDDCKLGSVDDIAAAVYQMLGRIQEEALMLN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1784 327 PANTHER MAX DIMERIZATION, MAD 14 325 - -
Aed8g1784 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 193 IPR036638 GO:0046983
Aed8g1784 327 MobiDBLite consensus disorder prediction 50 94 - -
Aed8g1784 327 MobiDBLite consensus disorder prediction 106 122 - -
Aed8g1784 327 MobiDBLite consensus disorder prediction 106 138 - -
Aed8g1784 327 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 14 325 - -
Aed8g1784 327 MobiDBLite consensus disorder prediction 63 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1784 Aed-Chr8 22695742 22697657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1784 14 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 43.168 2.83e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1784 - - pvu:PHAVU_007G181900g 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1784 8 22695742 22697657 Aed8g1784 8 22695742 22697657 ECH
Aed2g2492 2 27659098 27660903 Aed8g1784 8 22695742 22697657 PCT