Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1780 ATGGAAGTTAATACTACTCCAACCACTCTACCTTCAGGGCCACCAACTAGAAACCATTCTTACACACAGCACCACTTGCATTCAGAAAAACATAGCCATAGCCATAACCATTTCCCCTCCAAAACCATTCTTCTCATAACCATCTCATTGGTCACCTTAGTCACAGTCCTATTTATCATTGTTGTGATCTTATTCTTGATCCGTCGCCAAAAATCTTCCAGCCAGAATGGAACTTGCGAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATCACCACAACAACATTGAACTCTAGCCCAGATGTGAAGAGTGGGTGTCTTCATGGGGGAAATTTGAGCAGGACCCCAGCACCTAAATTTCGTGGTGTCCAAGTTTTCACTTATAGGGAGTTAGAAATTGCCACGAATGGATTCAGTGAAGCAAATGTGATTGGTGGCAATGGAATTATTATGTACAGAGGGGTTCTAAGTGATGGCACTTTGGCAGCAATTAAGTTGCTTCACACTGAGGGTAAGCATGGGGAACGTGCCTTCAGAATAGAGGTCGATCTCTTAAGTCGCTTGCACACTCCATATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTACGCCACGGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTCACGGGACGTGTGCCTGTTGATATCAAGAGGGCCCCAGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAATAGAGATAAGGTGATTGAAATGGTTGATCCAGCTCTACGAGGACAGTACTCAAAGAAGGATTTAATTCAGGTCAAATTTGGTGTTGTTCTCTCATTCTCATCACTATCACTTGATGATTATATTATATTTTCCCCATCAACTGACATTTGCTTTCTGCTACAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCTCTAATGACAGATGTTGTACAATCACTGATACCACTTGTTAGGAACCAATCCTCTCTTAGTTCATCTAGCTCCCTACGGTTTCAGAAACAAACGCCAAGTCCAAGACATTAA 1101 0.4387 MEVNTTPTTLPSGPPTRNHSYTQHHLHSEKHSHSHNHFPSKTILLITISLVTLVTVLFIIVVILFLIRRQKSSSQNGTCEEDSRELHDTSSRLITTTTLNSSPDVKSGCLHGGNLSRTPAPKFRGVQVFTYRELEIATNGFSEANVIGGNGIIMYRGVLSDGTLAAIKLLHTEGKHGERAFRIEVDLLSRLHTPYLVELLGYCADQHHRYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNRDKVIEMVDPALRGQYSKKDLIQVKFGVVLSFSSLSLDDYIIFSPSTDICFLLQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNQSSLSSSSSLRFQKQTPSPRH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1780 366 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 211 283 - -
Aed8g1780 366 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 209 - -
Aed8g1780 366 Gene3D Phosphorylase Kinase; domain 1 114 209 - -
Aed8g1780 366 PANTHER OS01G0750732 PROTEIN 211 283 - -
Aed8g1780 366 PANTHER OS01G0750732 PROTEIN 311 365 - -
Aed8g1780 366 PANTHER OS01G0750732 PROTEIN 1 209 - -
Aed8g1780 366 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 311 365 - -
Aed8g1780 366 MobiDBLite consensus disorder prediction 1 21 - -
Aed8g1780 366 Gene3D Transferase(Phosphotransferase) domain 1 210 278 - -
Aed8g1780 366 SUPERFAMILY Protein kinase-like (PK-like) 120 339 IPR011009 -
Aed8g1780 366 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g1780 Aed-Chr8 22644429 22647331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1780 201 364 Receptor kinase-like Gene Family AT3G58690 54.762 1.36e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aed8g1780 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1780 - - gmx:100809810 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1780 8 22644429 22647331 Aed8g1780 8 22644429 22647331 ECH