Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g1773 ATGGAAGATGACGCAGCGATTGAGGCGAGCAAGAGCAACCATGCTGGCCCAGAGGCAGATCCCAGTTGCTGTTGCCCAATTTGCCTGGGACCATTCCTTCAACTATCGTACCTCGACAAATGTTTTCATAAGTTTTGCTTCAATTGCATTTTACGCTGGGCCAAGGTGATTGCTGGCAAGGACCGTTCTCCACCTTCTTCTGTAAAATGCCCCCTCTGTAAGACAGAAAGTTTTTCTATCATATATGGAGTTGACGGGAGTTGTTTTCAACGACATTATGTAAATCAGGATTTTGAGGATAGTTTTATCTTATCAAGAGTGCACAGATATAGATTACAATGCTATTACACTGAACAAGGTTTCTTAGAAGACGTATTCAATATATCACAATATTGGAGATCTCAAAAGTACAATCAGCCAAACAGCTGGCTTGAAAGTTGGTTAAGAAGAGAATTTCAAGCTCTTGTACAGGAGGAGGATGTTGACATCATTGTGCACCATATCCTTGGTGTGGTCAAAGCAGCATTATGGACTAGGAGAGAGCAGAAGTCACACATGAATGCACCTGAAAAGAAACAGGAGGAGTTCAAGATGTCAGTCTCTGAAGCCGCAAAGCCCTTTCTGGCAGCAAGAACAGACAGATTTGTATATGAGATTCAACTATTTCTTGCTTCAGGATTGAATATTGAAGCTTATGATGCTGTTTACATACAACGGTTAGGTTGGAGCTCACCCGGGGTAAACACTGAGGTTTCTCAAAGGGAACTAGTTGATCGCACAACTGTGATTCCATACTTGTACATATTTGATGGTGACTATGATGAAAATGACTAG 834 0.4173 MEDDAAIEASKSNHAGPEADPSCCCPICLGPFLQLSYLDKCFHKFCFNCILRWAKVIAGKDRSPPSSVKCPLCKTESFSIIYGVDGSCFQRHYVNQDFEDSFILSRVHRYRLQCYYTEQGFLEDVFNISQYWRSQKYNQPNSWLESWLRREFQALVQEEDVDIIVHHILGVVKAALWTRREQKSHMNAPEKKQEEFKMSVSEAAKPFLAARTDRFVYEIQLFLASGLNIEAYDAVYIQRLGWSSPGVNTEVSQRELVDRTTVIPYLYIFDGDYDEND 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g1773 277 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 276 - -
Aed8g1773 277 ProSitePatterns Zinc finger RING-type signature. 41 50 IPR017907 -
Aed8g1773 277 ProSiteProfiles Zinc finger RING-type profile. 25 74 IPR001841 -
Aed8g1773 277 Pfam Zinc finger, C3HC4 type (RING finger) 25 73 IPR018957 GO:0046872
Aed8g1773 277 SUPERFAMILY RING/U-box 22 80 - -
Aed8g1773 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 131 IPR013083 -
Aed8g1773 277 SMART ring_2 25 73 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g1773 8 87 C3H Transcription Factor Family AT5G19430 35.714 1.75e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g1773 - - gmx:100808733 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g1773 8 22611334 22613523 Aed8g1773 8 22611334 22613523 ECH